Paracoccidioides brasiliensis: PADG_05520
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Entry
PADG_05520 CDS
T03549
Name
(RefSeq) cleavage polyadenylation factor subunit CLP1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PADG_05520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbn03019
]
PADG_05520
Enzymes [BR:
pbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
PADG_05520
Messenger RNA biogenesis [BR:
pbn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PADG_05520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
AAA_35
ABC_tran
SRPRB
nSTAND3
Motif
Other DBs
NCBI-GeneID:
22584433
NCBI-ProteinID:
XP_010760773
UniProt:
C1GE34
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MSLPGLELTQATVEERSKPAAPVQHSLSRGSEWRFEVAFGQIVRVKLLAGTAELFGTELA
ASQTYTFSGTKAAIYTWHGCTLEVSAGDPIAIGGLGSTPPSPGSGSGGCQVEYIAEETPM
AEYVNIHAALETMREEAKAAGCEGPRVLILGPEDAGKTSLTKILTGYATKRDRQPVVVNL
DPSEGMLSVPGSLTATAFRSMIDVEEGWGSSPMSGPSPIPVKLPLVYFYGLSSPLDAEGQ
LYKPIVSRLALAVAGRLVEDRDAKEAGIIIDTPGILGQGKGDDVIHHIITEFSVTTILVL
GSERLYSSMVKNYDNKPISASTSTSNSTTSPSTLDHISVVKVTKSGGSVDRDASFMKNVR
EWQMRSYFFGNPIPSIASSALSLSATSSGTTISLSPHAQQLDFDSLSIYTITATSDDDDE
YDPSSFSVNGSSFLPGGIHDHDNGTNPQTQQQLQQSIDPTTASSSLLPIPGLSSASTTSP
SSPLHAYIPLKKLPPSTISPIPLALENTLLAVTHAAPNAPLNEIRDASVMGFVYVASVDE
KKAKIRVLAPVGGRVPGRAMIWGKKWPGELVGLVG
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccctggcttagagctcacccaagctaccgtagaagagcggagtaagccggca
gccccggtacaacatagcctctctaggggatcggaatggagatttgaagtcgcatttggc
cagattgtaagagtgaagctcctcgccggcaccgcagagctctttggcaccgaacttgcc
gcctcccaaacatataccttctccgggaccaaagccgctatatacacttggcatggctgc
acgttggaagtaagcgccggcgaccccatcgccattggcgggttgggcagcacgcctcca
tctcccggctccggcagtggcgggtgccaggtggaatacatagcggaggagacgcccatg
gctgagtatgtcaatattcatgctgcgcttgagactatgcgcgaggaagccaaggcagcc
ggctgtgaaggtccgcgagtactcattctgggaccggaggatgcgggcaagaccagcttg
acaaagatccttacgggatatgcgacgaagagggacagacagcctgttgtcgtaaatctc
gacccgtcggaggggatgctgagtgtccctggaagcttgacggcgacggcgttccggtct
atgattgatgtggaggagggatgggggagtagtcctatgtctgggccgagtccaatacct
gtcaagctaccacttgtgtatttttatgggctgtccagtccgctggatgcggagggtcag
ctgtacaaacctattgtgtcaaggctggcgttagcggttgctgggaggttggtggaggat
agggatgcaaaggaagctgggattattattgatacccctggaattcttgggcaagggaag
ggagatgatgttattcatcatattattacagagttttcagtcacgacaatcctagtcctc
ggctctgaacgtctctacagctccatggtgaaaaactatgacaacaaacccatctccgct
tccacctccacatcgaattccactaccagcccctcgaccctggatcacatctccgtcgtc
aaagtgacgaaatccggaggcagcgtcgaccgcgacgcttccttcatgaaaaacgtccgc
gaatggcaaatgcgctcctatttcttcggcaaccccatcccctccatcgcctcctcagct
ctatccctctccgccacctcctcaggaacaacaatatccctctccccgcacgcacaacag
ctcgacttcgattccctatccatctacaccatcaccgccacttcagacgacgatgacgaa
tacgacccctcctccttcagcgtgaacggatcctccttcttacccggtggcatccacgac
catgacaacggtaccaatccccaaacacagcagcagcttcaacaatccatagaccccacc
acagcatcctcgtccctcctccccattccgggactctcatctgcctccaccacatcaccc
tcatcacctttacacgcctacatccccctgaagaaattgccgccttcaactatttcaccc
attccactagctctggaaaatacccttctggcagtcacccatgcggcgccaaacgcaccg
ctcaatgagatccgcgacgcgagcgtcatgggcttcgtctatgtcgcaagcgtggatgag
aagaaggcgaagattagagtcctggcacctgtgggggggagggtgccgggcagagctatg
atttgggggaagaaatggccgggggagttggtgggtttggttggctga
DBGET
integrated database retrieval system
