Paracoccidioides brasiliensis: PADG_05545
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Entry
PADG_05545 CDS
T03549
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PADG_05545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbn03041
]
PADG_05545
03009 Ribosome biogenesis [BR:
pbn03009
]
PADG_05545
Enzymes [BR:
pbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PADG_05545
Spliceosome [BR:
pbn03041
]
Complex A
U2 snRNP components
U2 related factors
PADG_05545
Complex B
PADG_05545
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PADG_05545
Ribosome biogenesis [BR:
pbn03009
]
Eukaryotic type
90S particles
Helicases
PADG_05545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
ABC_tran
T2SSE
AAA_30
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
22584452
NCBI-ProteinID:
XP_010761045
UniProt:
C1GE59
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MGDQRLDGDSSSRAKKRQKTETADMDPRQNKYLAHWYEDEKPSNGHSAEGSILDEFERHK
TTAAMAREAEDAAVNPFNGKPLSNRYFSILKQRRDLPVHSQRDEFLQLYQQSQILVFVGE
TGSGKTTQIPQFVLFDDLPHQRGKLVACTQPRRVAAMSVAERVAAEMDVKLGEEVGYSIR
FEDMTSQKTMLKYMTDGMLLREAMHDHDLKRYSTIILDEAHERTMATDVLMGLLKEVVQR
RPDLKLIIMSATLDAQKFQRYFCDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQI
HANEPEGDILLFLTGEEEIEDSVRKISLEVDEMIREADAGPMKVYPLYGSLPPGQQQRIF
EPAPPPRKEGGRPGRKCIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSP
ISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQTYPEILRSNLSSTVLDLKKLGIE
DLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSPE
FYCSNEILSITSLLSVQQIFVRPASQRKRADEMKNLFAHPDGDHLTLLNAYHAFKSPEAQ
ANPRQWCHDHFLSLRALQSADNVRQQLQRIMEREEIELVSTPFEDKKYYENIRRALVAGF
FMQVAKKESQGKNLYRTVKDNNEPVLLHPSSVLGHEAEWVLYNEFVLTTKSYVRTVTAVK
GEWLLDIAPIYYDISSFPKGEIRSALIRAMERLSRKEKMRADKERRH
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcagcgactcgacggtgacagctcttcccgtgcgaaaaagaggcagaagacc
gaaactgcggacatggaccctcgtcagaacaagtacttagcccactggtatgaggatgag
aagccttcaaacgggcattccgctgaaggttccatcctggacgagtttgagcgacacaag
acaactgctgccatggccagagaagcggaggatgctgcagtaaaccccttcaacggaaaa
ccactttcaaaccgctatttttcgatcttgaaacagcgaagggatctgcccgttcattct
cagagagatgagttcttacaactgtaccagcagtcgcaaatcctcgttttcgtcggtgag
accggttcgggaaagactactcagatccctcagttcgttcttttcgacgatcttccgcat
cagcgcgggaaactggtagcatgtactcagcccagacgagttgcagctatgtcggttgca
gagcgggttgcagctgagatggacgttaagcttggggaggaagtcggttacagcattcga
tttgaggacatgactagtcaaaagacgatgctgaaatatatgacggatggaatgttattg
cgtgaagcaatgcatgatcatgacctgaaacgctacagcactattatcttggatgaggcc
catgagagaacaatggccactgatgtgctcatgggtttgcttaaggaggtggttcaacgt
cgaccagatcttaaattgattatcatgtcagctaccctggatgcccagaagttccagcga
tacttttgtgatgcgccactcctcgcagtccctgggcggacccatcctgttgaaatattt
tataccccggagccagagcaagattatgtggaggcggctattcgaacagttttgcagatt
cacgccaacgagcctgagggtgatatcttactcttcttgactggtgaagaggaaatcgaa
gactctgtgcgcaagatatctcttgaggtggatgagatgattcgagaggccgacgcaggg
cccatgaaagtttatcctctctatggaagtttacctcccggtcaacagcagcggattttc
gaacctgccccgccgccccgcaaggaaggagggcgacccggacggaagtgcatcgtgtct
accaacattgcggaaacctctctgactattgacggtatcgtgtatgttgtggaccctgga
ttctccaagcagaaggtatacaatccacgcatccgtgttgaatcgttgttggtatcacca
atctccaaagcctcagcccagcagcgtgctggtcgtgccggccgtacgcgccctggaaaa
tgtttcagactatataccgaagaggcgttcaagaaagaactcattgaacaaacatatccg
gaaattctccgctccaatctatcgtccacagtattggaccttaaaaagcttgggatcgag
gatctagtccacttcgaccttatggatccaccagcccctgaaactctcatgcgagctttg
gaagaactaaactatctggcttgtttggatgacgatgggaatcttactccgctaggccgt
cttgcatctgagttcccgttggaccctgcgcttgcagtgatgttaatcagctcaccggaa
ttctactgttccaacgagatcctttcaattacctccttgctttcagtccaacaaatcttc
gttcgcccggcctcccaacgcaagcgtgctgatgaaatgaagaacctcttcgcacacccg
gatggcgatcaccttaccctcctaaacgcgtatcacgctttcaaaagtcctgaagcccaa
gccaacccacgccagtggtgccacgatcacttcctttcccttcgagctctacagtccgca
gataacgtccgccagcagctgcagcgtatcatggaacgtgaggagatcgagcttgtatcc
accccattcgaagacaagaagtattacgaaaatattcgtcgcgcattggttgcaggcttt
tttatgcaagtcgctaagaaagagagccagggaaagaatctatatagaactgtcaaggac
aacaatgagcctgttttgttgcatcccagcagtgtccttggacacgaagcggaatgggtc
ctgtacaatgagtttgtgcttacaacaaagagctatgtccgaacagtcactgccgtgaag
ggagagtggctcttggatattgcaccgatttattacgacatatccagctttcccaagggt
gagattcgctccgcgcttatccgtgccatggaacgtctttctcgcaaggagaagatgcgt
gctgacaaggagaggaggcactaa
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integrated database retrieval system
