Paracoccidioides brasiliensis: PADG_05975
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Entry
PADG_05975 CDS
T03549
Name
(RefSeq) exosome non-catalytic core subunit RRP4
KO
K03679
exosome complex component RRP4
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PADG_05975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbn03019
]
PADG_05975
Messenger RNA biogenesis [BR:
pbn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PADG_05975
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PADG_05975
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
DUF3439
Motif
Other DBs
NCBI-GeneID:
22584805
NCBI-ProteinID:
XP_010761285
UniProt:
C1GFD9
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MVITILPPSRPEEQFDSSDDESRDSEGDVDMSGDHSRPANRLRLSKGAIVTPGEVITDDP
QWMRGHGTYTRSAHNPYSTTTTTTTTTATNPSATSNTIIATVAGTVLKTNKLLSVQPLRA
RYTPEIGDLVVGRIVEVQSRRWKVDVAAPLLAQLPLSAINLPGGILRKRTTADELQIRSF
FNEGDLLVAEVQAVHQDGAASLHTRSLKYGKLRNGVFLTVAGMGAAGGVVRGTGVVRSRR
QVWTLTAGNGGGEIDVILGVNGYIWISKHVVGDGFGVDAASSGEVSITRMDEMVSSAIYS
SQNDEIGLATRREISRLCGCIRVLVEGNVKVDEDTVMKAYEASMEIELEVGDDGSVGEGG
EGREYLGGEKARRVVKAALRP
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggtaatcaccatactccctccctctaggccggaggagcaattcgactcttcagacgac
gagtcaagagactcagaaggtgatgttgacatgtccggggaccattcgcggcctgcaaat
cgtctccgcctctcaaagggcgcaatagtcacgccgggagaagtgataacggatgatccc
caatggatgcgaggccacggcacttacacccgctccgcgcataacccatactccaccacc
accaccaccaccaccaccaccgccaccaacccctccgcaacatccaacacaatcatagcc
accgtcgccggcacagtcctaaaaaccaacaaactcctctccgtccaaccgctacgagcc
cgctacacccccgaaatcggcgacctggtcgtcgggcgcatcgtcgaagtccaatcgcgg
cgctggaaggtcgatgtcgcggcccccttgcttgcccaactgcctctgtccgccataaac
ctgccaggcggcatactgcgcaaacgcaccactgccgacgagctgcagatccgctcattt
ttcaacgagggagatctgttggttgcggaggtgcaggcggtgcatcaggatggcgctgca
tcgctgcatacgcgctcgctgaagtatgggaaattgcgaaatggggtgtttttgaccgtt
gctgggatgggtgcggccggtggggtggttcgggggaccggggtggtcaggtcgcgcagg
caggtgtggacgctcaccgcggggaatgggggtggggagattgatgtcatattaggggtg
aatgggtatatttggatttcgaaacatgttgttggagacgggttcggggttgacgctgct
agcagtggggaagtgtcgattacgcgcatggatgagatggttagtagtgcgatttactcg
agtcagaatgacgagattgggctggcgacgcggagggagatttccaggctctgcgggtgc
attagggtgcttgtggagggtaatgtgaaggttgatgaggacacggtcatgaaggcgtat
gaggcgagtatggaaattgaattggaggttggcgatgacgggagtgtgggagagggcgga
gagggaagagagtatttaggtggtgagaaggcgaggagagttgtgaaggccgcattgagg
ccatag
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integrated database retrieval system
