Paracoccidioides brasiliensis: PADG_06486
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Entry
PADG_06486 CDS
T03549
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PADG_06486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbn03019
]
PADG_06486
Messenger RNA biogenesis [BR:
pbn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PADG_06486
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PADG_06486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
SPESP1
RPW8
Motif
Other DBs
NCBI-GeneID:
22585201
NCBI-ProteinID:
XP_010761769
UniProt:
C1GGP9
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MASRKTQQEIDKTFKKVGEGIQSFESIYEKIKSSSNAAQRDKLEDNLKREIKKLQRFRDQ
IKTWAAGNEVKDKGPLLEQRRAIETCMEQFKAVEKEMKTKAYSKEGLSAAARQDPKEKER
TETCEFLSSTVDILQQKIEAFEAEEEMIQASLKKGKKDAAKTTRLADIARISERHRWHLA
KLELLLRSLQNGHVETSQVLDIKDSIKYFADDGHNADFCGEDETIYDDITLGDDEAQFGM
PNDTDRVSSQDTQSIQDDDADMGVPRPSKAKAEPGATRRSSTQVKSPLPVLATLHLSGPS
SSSGNTMKPAPLPTRLPGETLKYASAAAAAAASDKSGVGIAPLPPPPGASPALSHALPVS
KASSTSSPQVHHAQPVQRLASAVASVDDSSSSQQQSKSPTLSPSVPAASQPATEPPTPAM
DNVETVSPPQEQQQQQQPEPEPEPEPEPQQQQQQQQQQQQQQQQQQQQQLLLLQQQQRHQ
GPNGSAKEESTTTNTSTTATTDESVYHLPPGLQDLIQSFELTKSRISMNPTSTASTSTQR
LLTASHHTCPEPSDCERPHHYRPQTPYNTPLYYPQEPLPIFDDPRLYETSRIDTDTLFYI
FYYRQASYQQFLAAKSLKNQSWRFHKQYQTWFQRHEEPKTITEEFEQGTYRFFDYESTWM
NRRKADFKFVYKFLEDDL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcgaaaaacacagcaggaaattgacaagaccttcaagaaggttggtgaaggc
atacagtccttcgagagcatatacgagaagatcaagtcctcctcaaacgctgcccaaaga
gacaagctcgaagacaacctgaaacgcgaaataaaaaaactacagcggttccgtgaccag
atcaagacatgggctgcaggaaatgaagtcaaagacaaaggcccgctgttagagcagcgg
agggctattgaaacttgcatggagcagttcaaagccgttgagaaggagatgaaaaccaag
gcctactcgaaagagggtctatcggcggcagccaggcaagatccgaaagaaaaggagagg
accgaaacatgcgagttcctgtcctccaccgtcgacatcctacagcagaagatcgaggct
tttgaagctgaggaagaaatgatacaggcgtcgttaaagaaagggaaaaaggatgcagca
aagaccacccggctagccgatattgcgaggatctcagaacgacatcgatggcacctggcg
aaactggaactacttctccgttctctacaaaatggccacgtcgaaacgagtcaagtgttg
gatatcaaggacagcatcaagtacttcgcagatgatgggcataatgccgacttttgtggg
gaagatgagacgatatacgatgatataacgctcggggacgacgaggcgcaattcggcatg
cccaacgacactgaccgcgtatcatcgcaggatacacagtcgatacaggatgatgatgca
gacatgggtgtaccgaggccatcaaaggcgaaagcggaacctggtgctactcgacggtca
tcaacgcaggtgaaatcaccactacccgttctagctacgctacacctctccgggccctca
tcctcatccggtaacacgatgaagcctgcgcctctacctacgcgattaccaggcgaaacg
ctgaagtatgcttcagcggctgccgcggctgcagcaagtgacaagagtggagttgggatc
gccccgcttcctccgccgcccggtgcaagcccggctctttcgcatgcgttgcccgtctcc
aaggcttcctcaacatcctcgccacaggtgcatcacgcacagcctgtgcaaaggctcgca
tctgcagttgccagcgtggatgattcatctagtagtcaacagcaatccaaatcgccaaca
ttgagtcccagtgttcccgcggcgagtcaaccagcgacagagccaccaaccccggcaatg
gataatgtggaaaccgtttccccgccacaagaacagcagcagcagcagcagccagagcca
gagccagagccagagccagagccacagcagcaacagcagcagcagcaacaacaacaacaa
caacagcaacagcagcagcaacaacaactactactactacaacaacaacaacgacaccag
ggacccaacggctccgcaaaggaagaatccacaaccactaacacctcaacaaccgctacc
accgacgaatccgtctaccacctccccccgggcctccaagacctaatccaatccttcgaa
ttaaccaaatcccgtatttccatgaacccaaccagcacagcctcaacttctactcaacgt
ctcctcacagcctcccaccacacctgcccggaacccagcgactgcgaacgaccccaccac
tacagaccacaaaccccttacaatacccctctctactacccgcaagaaccgctgcccatc
ttcgacgacccgcgcctctacgagaccagccgcatagacactgatacgctgttttatata
ttctattaccggcaggcgagctatcagcagttcctggccgcgaagtcgttgaagaatcag
agctggcggttccataagcagtaccagacgtggtttcagaggcatgaggagccgaagaca
attacggaggagtttgagcaggggacgtatcggttttttgactatgagagtacatggatg
aaccgccgaaaagccgatttcaaattcgtctacaaatttctggaagatgacttgtaa
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