KEGG   Paracoccidioides brasiliensis: PADG_07978
Entry
PADG_07978        CDS       T03549                                 
Name
(RefSeq) ssDNA endodeoxyribonuclease RAD1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
pbn  Paracoccidioides brasiliensis
Pathway
pbn03420  Nucleotide excision repair
pbn03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pbn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PADG_07978
   03460 Fanconi anemia pathway
    PADG_07978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbn03032]
    PADG_07978
   03400 DNA repair and recombination proteins [BR:pbn03400]
    PADG_07978
DNA replication proteins [BR:pbn03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    PADG_07978
DNA repair and recombination proteins [BR:pbn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     PADG_07978
SSDB
Motif
Pfam: ERCC4 HHH_5 HHH_2 HHH
Other DBs
NCBI-GeneID: 22586362
NCBI-ProteinID: XP_010763262
UniProt: C1GKX1
LinkDB
Position
Unknown
AA seq 964 aa
MSEESPVVKLSLPLQYQQDLFSELRSEDELVILARGLGLLRIVTNLLHSYDATGNNLVIV
VGADRRENEWIGEALAEHYAVSRTPLVRGLKVINTDQATVPMRQTMYTQGGILSVTSRIL
VVDLLSKLLDPESITGLIVLHAEKIVATSQEAFIIRIYRQFNKVGFLKAFSDSPEPFTIG
FNPLANMMRNLFLRKTSLWPRFQVTVAESLEGRKKAEVIELEVPMTDKMRDIQNAVLECV
EANIRELKKANSGLDIEDWTVDSALHQNFDVAIRRQLDPVWHRVSFRTKQIASDLTVLRS
MLLSLLTYDSVSFNKYLDVIIAAHSPPPGSNKQNFSPWLFLDAAHVIFKTAKSRVYRGKN
DPCEQLSDTSSLPPSLEPVLEEQPKWSVLADVLDEIERSTYLNPVPPGDSNGTILIMCSD
GKTCRQIREYLETMRIKVKSSKDATETEIESDDSPSGEFMLRRNLIHYLNWKRNSTRVNS
NLFTTKSRQEPGTVAGYNSLSSSTNYHGRVPPNKRRRLRGGASGLTPARGASSSVQPDTE
VPTQVSTLLEEIQLEEPEDGAIEAELVVDDLSDMEDYYGLYDMNDLLMICPYDGDMDDHV
LEEVKPRYIIMYEPDAAFIRRVEVYRSSHTNREVRVFFLYYSGSVEEQRYLSAVRREKDA
FTKLIKEKGSMALTITHDKSAEDPQEQFLRTVNTRIAGGGRLAATAAPPTVVVDVREFRS
ALPSLLHGRSMVVVPCQLTVGDYILTPDICVERKSIRDLQSSLKNGRLYNQAETMLQHYK
NPVLLIEFDQNKSFTFDAFTSATNTPGSESFSTNLINPTNPKSIQLLLTLLTLSFQRLKI
IWSSSPYQTAEIFAELKKNNPEPDPIRAVQMGLDFEITSTAGADKIMSAAGVEHRTFNQL
PHDMLRAVPGVTPKIAERLVLETDNLQQIANMEMEELEPLVGKEVGRQILRFFRRNVFDE
ERAD
NT seq 2895 nt   +upstreamnt  +downstreamnt
atgtctgaagaaagtccggtagtgaagctatcgttgccgctgcaatatcagcaggactta
ttctcagagctcaggtctgaagatgagctggttattctcgcaagaggacttggcctgtta
cgtattgtaacgaatctcctacactcttatgatgctaccggcaacaacttagtcatcgtg
gttggcgctgaccgtcgggaaaatgagtggattggagaagcgctggcggagcattatgcc
gtgagcagaactccattagttcgtggcctgaaagtaatcaatactgaccaggccaccgtt
cccatgaggcaaacaatgtacacccaagggggtatcctgagtgtgacatctcggatattg
gttgtcgatctgctgtcaaaacttctggaccctgagagtattaccgggctaattgttctc
catgctgaaaaaatcgtggctacatctcaagaggcattcattatccgaatatatcggcag
ttcaataaagttggctttcttaaagcgttctcggactctcccgaacctttcactattggt
ttcaatcctttagccaatatgatgcggaatctatttcttcggaaaacctccctttggccg
agattccaggttacagtagcagaatccctagaaggtcgtaagaaagcagaggtcatcgag
ctagaagtccccatgacagataaaatgagagatatccaaaacgccgttctagaatgtgtt
gaagccaatattcgagagcttaaaaaggcaaattctggactggacatcgaagactggaca
gtggacagcgcattgcatcaaaattttgatgtcgctattcgacgccaattggatcccgtg
tggcaccgagtcagctttaggacaaagcaaatagctagtgatttaaccgtccttcgatcg
atgcttctgtcattactaacatacgattctgtctcttttaataaatacctcgacgtcata
atagctgcacactcgccacctcctggatcaaataagcagaatttctccccctggcttttt
cttgatgcagctcatgttatatttaaaactgccaagtcaagagtttatcgcgggaaaaat
gacccctgcgagcaactgtccgacacatcttctttaccaccatcgctagagccagtacta
gaggagcaaccgaaatggtcggttctggcggacgtgctagatgaaatcgagcgcagcact
taccttaatcctgttcccccaggagactccaatgggactattctgatcatgtgcagtgac
ggcaaaacatgccgccaaattagagaatatcttgagacaatgcgtattaaagtcaaatca
tctaaagatgccacggagactgaaattgagtcagacgacagcccttctggggagtttatg
cttcgtaggaatctcatacattatctaaattggaaacgtaactctaccagagttaacagc
aatctcttcactacgaagtcaaggcaagagccaggcacagttgcagggtacaattcactg
agctcctcaacgaattatcacggaagggtacccccaaataagagaagacgtcttcgcggt
ggtgcctcggggctcacaccagcaagaggtgcaagcagcagcgtgcagccagatacggag
gttccaacgcaggtatcgacattgttggaagaaattcagctcgaagaaccagaagacggt
gctattgaggctgaactggtggtcgatgatctgtcagacatggaagattactatggtctt
tatgacatgaatgatcttttaatgatatgtccatatgatggagatatggatgaccatgtg
ctcgaagaagtcaaaccacggtacatcattatgtacgagccagacgctgcatttatccgc
agagtagaggtctatcggagttctcacacaaaccgggaagtcagggttttctttttatat
tacagcggctcagtcgaagaacagcgatatctaagtgctgttcggagggaaaaagacgca
ttcactaaactaatcaaggaaaaggggtccatggcccttacgatcacccacgataaaagc
gctgaagatcctcaagaacaattcctccgaacagtgaacacccgcattgcaggtggaggc
cgattggccgcaacagccgcaccacccaccgtcgtcgtagacgtgcgtgaattccgcagc
gctctcccatcgctcctacacgggcgcagcatggtcgtggtcccgtgccaactaacagtg
ggggactacatccttaccccagacatatgcgttgagcgaaaatcgatccgagatctacag
tcttcccttaaaaacgggcgattatacaaccaagcagagacgatgttacaacattacaag
aaccccgtcctgctaatcgaattcgaccagaataaatccttcaccttcgacgcgttcaca
tctgccacgaacacaccaggctcagagagcttctctaccaaccttataaacccaacaaac
cccaaatccatccaactcctgctcaccctgctaactctatccttccaacgtctgaaaatc
atctggtcctcctccccctaccaaaccgccgagatattcgcagagctaaaaaagaacaac
ccggagccagatcccatccgcgccgtgcagatgggtctagactttgaaatcacatctacc
gcaggcgccgataaaatcatgtcagctgcgggagttgagcatcgaaccttcaaccagctg
ccgcatgacatgttacgggcggttccaggggtgacgccgaagatagcggagcggttggtt
ctagagacggataatttacagcagattgcgaatatggagatggaggagttggagccattg
gttgggaaggaggttgggaggcagattttgaggttttttcggaggaatgttttcgatgag
gagagggctgattaa

DBGET integrated database retrieval system