Paracoccidioides brasiliensis: PADG_08708
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Entry
PADG_08708 CDS
T03549
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03018
RNA degradation
pbn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PADG_08708
09123 Folding, sorting and degradation
03018 RNA degradation
PADG_08708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbn03019
]
PADG_08708
03041 Spliceosome [BR:
pbn03041
]
PADG_08708
Messenger RNA biogenesis [BR:
pbn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PADG_08708
mRNA degradation factors
5'-3' decay
Lsm complex
PADG_08708
Spliceosome [BR:
pbn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PADG_08708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
TPR_DOCK
Motif
Other DBs
NCBI-GeneID:
22586907
NCBI-ProteinID:
XP_010764008
UniProt:
C1GN72
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MASQLLPLGEARLDSIWFTDELYDFCMLNTYMFLELIDKCVGSKIWVVMKGDKEFSGTLL
GFDDYVNMVLEDVTEFDYTGAQTKLPKILLNGNNVCMLAYLIHGGKLSEYIAATRFDNSL
ETFVVAFVFFHPRKLQGSVGRTTDLPVSLNNPEFVV
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcaactacttcctctaggtgaggctcgacttgattcgatttggttcactgat
gaactctatgatttttgtatgctaaacacttatatgtttttagagttgattgataaatgt
gtgggttcgaaaatctgggttgtcatgaaaggcgataaagaattctcaggcaccctgctc
ggttttgatgactacgttaatatggtcctcgaagatgtgactgaatttgactacacgggc
gctcagaccaaactaccgaagatcctcttgaacggaaataatgtctgcatgcttgcatac
ctgattcatggcgggaagctgagtgaatatattgcagcaacgagatttgataattcactg
gaaacctttgttgttgcgtttgttttcttccatcccaggaagttgcagggatcagtcggc
cgcacgacagatctgcccgtcagcttaaataacccagaatttgtagtatga
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