Paracoccidioides brasiliensis: PADG_12304
Help
Entry
PADG_12304 CDS
T03549
Name
(RefSeq) tRNA-intron endonuclease
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
pbn
Paracoccidioides brasiliensis
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbn03016
]
PADG_12304
Enzymes [BR:
pbn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PADG_12304
Transfer RNA biogenesis [BR:
pbn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
PADG_12304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
22588201
NCBI-ProteinID:
XP_010762943
UniProt:
A0A0A0HW12
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MAPYTTVISTVANGSADGGNNKILEIHNDEAKPRSPHPRRPNYKHIHRYPLPLHVHPLPT
LIPHNPLSLISIVLSYLTCFISPPHQHVFPAYFDPATSSVHVTDAKVIRALWEMGFFGKG
SLSRSEPSWLEREKNRRGMIGDATSEEVTGKRRVERRERKLERARKEKEAIAEQLKAEAL
SRGIDSMDSALPSLETPVNGSVIKPDERNQEIPAQEKIVTTADLSTSGQHIANGNAENEP
MNGVKIVRFSPVVEEKEYDLVKAPLSHVPEVSVPPKREHSLVLKNEEHLQLSNEEAFFLV
YGLGVLQVYDSDRTTILTATSLLPLLRQHSYFPPRDSSMPGEPDDPFILSYVIYHHFRSL
GWVIRSGVKFGVDYLLYNRGPVFSHAEFAVCLLPAYSDPYWRVTEERRQMIAKKQGRTWW
WLHCVNRVQAQVKKSLILCYVEVPPPRPVAVDGERDCDELDIGALLKKYKVREMSIRRWV
PNRSRD
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggccccgtatactacagtcatttcgactgttgcgaatggatctgcagacggcggtaat
aataaaatattggaaatccacaacgatgaggctaaaccccgttctccccatccacgacgg
cccaattacaaacatattcatcgatatcctcttcccctccatgtccaccctttacctact
ttgattccccataaccctctctccctcattagtatagtcctgtcatatctcacgtgcttc
atttcgcctccccatcaacatgtcttccctgcatattttgaccccgcaacatcttcagtc
catgtcacagacgcgaaagtgattcgtgcgctgtgggagatgggcttctttgggaaggga
agcttgagtaggagtgaaccaagttggttggagcgggagaaaaatagaaggggaatgata
ggcgatgctactagtgaagaggttacgggaaaaagaagagtagagcggcgggagcgcaaa
ctcgagagagctaggaaggaaaaagaggctattgccgaacaactcaaagcggaagcgctg
tctcgtggtattgatagcatggactcagctttaccctcgttagagactcccgtgaatggc
tctgttattaaaccagatgaacggaatcaagaaataccagctcaagaaaagatagtcaca
acagcagatttatctacctccggacaacatatagccaatggaaatgctgaaaatgagccg
atgaatggcgtcaagatcgtgcgcttctcgccagtggtcgaagaaaaagaatatgatctt
gttaaagctcctctatctcatgtacctgaagtttcagtccctcctaaacgcgaacactca
ctcgtactaaaaaatgaagaacatctccaactgtcgaacgaagaagcctttttcctcgta
tacggcctgggtgtcttgcaggtgtatgacagtgaccgcaccacaatcctcactgcaact
tcccttttacccctcctccgccaacattcctatttccctccacgagactcgtctatgccc
ggagaaccagatgacccattcatactctcttatgttatatatcaccactttcgttctctg
ggttgggttatccgctctggcgtaaagtttggcgtcgattatcttctctacaatcgtggg
ccggtgttctcccatgctgagttcgcagtttgtctgctccctgcatattctgatccttat
tggagagtgactgaggaaaggaggcagatgattgcgaagaaacaggggcgaacttggtgg
tggctgcactgcgtgaacagagtgcaagcacaggtcaagaagagtctgatactatgctat
gtggaagtacctcctcctcggcctgtcgctgtggatggtgagcgtgattgtgacgagttg
gatatcggtgcgctgttgaagaagtacaaggtccgcgaaatgagcattaggcgatgggta
ccgaatcggagccgggattga
DBGET
integrated database retrieval system
