Acidipropionibacterium acidipropionici ATCC 4875: PACID_00110
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Entry
PACID_00110 CDS
T02345
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbo03032
]
PACID_00110 (gyrA)
03400 DNA repair and recombination proteins [BR:
pbo03400
]
PACID_00110 (gyrA)
Enzymes [BR:
pbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PACID_00110 (gyrA)
DNA replication proteins [BR:
pbo03032
]
Prokaryotic type
DNA Topoisomerases
PACID_00110 (gyrA)
DNA repair and recombination proteins [BR:
pbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PACID_00110 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Nnf1
Motif
Other DBs
NCBI-ProteinID:
AFV87864
UniProt:
K7RJ27
LinkDB
All DBs
Position
13849..16530
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AA seq
893 aa
AA seq
DB search
MADDENGPDEQNQADTQGLVTGRHTGIQPVEIRDEIQNAYLDYAMSVIVGRALPDVRDGL
KPVHRRVIYAMYDSGYRPDRGWNKCSRVVGDVMGKYHPHGDSAIYDTLVRLAQPWAMRYK
LVQGQGNFGSQGNDGAAAMRYTECKMAPLAMEMVRDIDQDTVDFQPNYDNKETEPVVLPA
RFPNLLVNGSSGIAVGMATNIPTHNLREVNEAVQWSLAHPEATKEELLEASMARIKGPDF
PGGALIVGRQGIEDAYRTGRGSVTMRAVIDMEEDKAGHQCLVVTQLPYMCNPDNLAQKIA
DLVNSGRVTGIANIRDDSSARTGQRLVIVLKRDAQPRVVMNNLYKHTALQDTFGCNMLAL
VDNVPRTLRLDQFISYWITHQLEVIRRRTEYRLAQAEKDAHIQRALVKALDALDEVIALI
RRSPNTETASTGLQELLGIDEVQARAILDMQLRRLAALERQKIIDRLADLERQIADFKDI
LANEARQREIVSTELAEIVDKYGDDRRTQIIAADGDFSEEDFIPDDDVVVTITRGGYAKR
TRIDNYRVQKRGGRGVRGAALKGEDEVAHLFATTNHQWILFFTNMGRVYRTKVWQLPEAS
RDARGGHVAGLLSFLPEEHITQVMTLRDYVTDPYLLLATRKGLVKKTALSAYDSSRAAGI
IAINFRSEDDELIGAELCGPEDDVLLISRKGQAIRFPASDDQLRPMGRVTSGVTGMKFRA
DDELLSMSIISADTPEDDRFVVTVTDGGFAKRTAVSEYRRQGRGGLGIKAMHLSEARGSL
VGGLVVSEADEIMAIKNSGQVTRSAVSEVPVKGRSTMGVKFVSVKGDDAVSIIALNPEAH
EDEVIDAASDGSAEGADADAPGSHEDPSQAPHGTVGEDTEGVEDVVTGEDDGE
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgacgagaacgggcccgacgagcagaaccaggccgacacccagggtctggtg
acgggacgtcacaccggcatccagcccgtcgagatccgcgacgagatccagaacgcctac
ctcgactacgcgatgagcgtcatcgtcgggcgcgccctgcccgacgtccgcgacggcctc
aagcccgtgcaccgccgcgtcatctacgcgatgtacgactccggctaccgccccgaccgc
ggctggaacaagtgctcccgcgtcgtcggcgacgtcatgggcaagtaccacccgcacggc
gactcggccatctacgacaccctcgtgcggctggcccagccctgggcgatgcgctacaag
ctggtgcagggccagggcaacttcggctcccagggcaacgacggcgcagccgccatgcgg
tacaccgagtgcaagatggcgccgctggccatggagatggtccgcgacatcgaccaggac
accgtcgacttccagcccaactacgacaacaaggagaccgagccggtcgtccttccggcc
cgcttcccgaacctgctggtcaacggctcttcgggtatcgcggtgggtatggccaccaac
atccccacccataacctgcgcgaggtcaacgaggccgtgcagtggtccctcgcccatccc
gaggccaccaaggaggagctcctggaggcctccatggcccgcatcaaggggcccgacttc
cccggcggggcgctcatcgtcggacgccagggcatcgaggacgcctaccgcaccggccgc
ggctcggtgacgatgcgcgccgtcatcgacatggaggaggacaaggccggtcaccagtgc
ctggtcgtcacccagctgccctacatgtgcaaccccgacaacctggcccagaagatcgcc
gacctggtgaactccggacgggtcaccgggatcgccaatattcgtgacgactcctcggcc
cgcaccggccagcgtctggtcatcgtcctgaagcgcgacgcccagccgcgagtggtgatg
aacaacctgtacaagcacaccgctctgcaggacaccttcggctgcaacatgctggccctg
gtcgacaacgtcccgaggacgcttcgtctcgaccagttcatcagctactggatcacccac
cagctcgaggtgatccgcaggcgcaccgagtaccggctcgcccaggccgagaaggatgcc
cacatccagcgcgccctggtcaaggccctcgacgccctcgacgaggtgatcgccctcatc
cggcgctcccccaacaccgagacggcgtcgaccgggctgcaggagctgctcggcatcgac
gaggtgcaggcccgggccatcctcgacatgcagctgcgccggctcgccgccctggagcgc
cagaagatcatcgaccggctggccgatctggagcgtcagatcgccgacttcaaggacatc
ctcgccaacgaggccaggcagcgcgagatcgtctccaccgagctcgccgagatcgtcgac
aagtacggcgacgaccgccgcacccagatcatcgccgccgacggggacttctccgaggag
gacttcatccccgatgacgacgtcgtcgtcaccatcacccgcggcggctacgccaagcgc
acccggatcgacaactaccgcgtccagaagcgcggcggcaggggggtccgcggagccgcg
ctgaagggtgaggacgaggtggcgcacctgttcgccaccacgaatcaccagtggatcctc
ttcttcaccaatatggggcgggtctaccgcacgaaggtgtggcagctgcccgaggccagt
cgcgacgcccgcggcggacacgtcgccgggctgctgagcttcctgcccgaggagcacatc
acccaggtgatgaccctgcgcgactacgtcaccgacccctacctgctgctggccacccgc
aagggtctggtgaagaagaccgcgctgagcgcctacgactcctccagggccgccggcatc
atcgcgatcaacttccgcagcgaggacgacgagctcatcggggcggagctgtgcgggccc
gaggacgatgtcctgctcatctcccgcaagggccaggcgatccgcttccccgcctccgac
gaccagctgcggccgatgggccgggtgacctccggcgtcaccgggatgaagttccgcgcc
gacgacgagctgctgtcgatgtcgatcatctcggccgacacccccgaggacgaccgcttc
gtcgtcaccgtcaccgacggcggattcgccaagcgcaccgccgtctcggagtaccggcgc
cagggccgcggcgggctcggcatcaaggcaatgcacctgtccgaggcgcgcggatccctg
gtcggcgggctggtggtcagcgaggccgacgagatcatggccatcaagaactccggccag
gtcaccaggtcggcggtctccgaggtgcccgtcaagggtcgctccacgatgggcgtgaag
ttcgtctccgtgaagggggatgacgccgtctcgatcatcgccctcaaccccgaggcccac
gaggacgaggtgatcgacgccgcctccgacggttccgccgagggcgctgacgccgacgcg
ccgggatcccatgaggatccctcccaggccccgcacggtacggtgggggaggataccgag
ggcgtcgaggacgtcgtgaccggagaggacgacggtgagtga
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