Acidipropionibacterium acidipropionici ATCC 4875: PACID_03940
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Entry
PACID_03940 CDS
T02345
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo00300
Lysine biosynthesis
pbo00470
D-Amino acid metabolism
pbo01100
Metabolic pathways
pbo01110
Biosynthesis of secondary metabolites
pbo01120
Microbial metabolism in diverse environments
pbo01230
Biosynthesis of amino acids
Module
pbo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PACID_03940
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PACID_03940
Enzymes [BR:
pbo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PACID_03940
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Motif
Other DBs
NCBI-ProteinID:
AFV88237
UniProt:
K7S0X8
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All DBs
Position
complement(449405..451114)
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AA seq
569 aa
AA seq
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MTEEPTLREACQGTPPLSARLEPWMQELLADPATCSSLLERYGSPLNVHDFSALPRNAAE
LTEVAEGSGVDLRISVARKANKTLGMVRAAHRAGLGVDVGSERELGQVLEAGVPPHDVVV
TAAIKPDPVLRLALESRSLLVLDNLDEVAASRRVAEQVTGARSAEPGRPADGASGAPEPF
PVALRLAPKPSDLIPPTRFGESARAWLELIDSGGLGDLLRVDGVHFHLHGYDPTARATAL
GEALELIDALRERGLAQDGAFVDIGGGIPMSYLDDAEQWDAFWQAHERQAPESGLGGGAR
AADDDRPAAAPDAGEDAPTAPLTWRREPLRQVYPYHQQVIRGPWLERFLGHEIRPGATAG
QALRERGVQLRCEPGRSMMDGCGMTLARVIQRTSASDGVPLVGLEMNRTQCRSTSDDFLV
DPILVRTGTRDDATDPSVAGAGQSRASERFEGFLVGAYCIEAELILRRRLAFPQGVAVGD
VIALPNTAGYLMHILESASHQIPLASNVERVGGGEAGGSGGDHPSAEVADRSRMGGTDHS
STAVEGSDPRPDVPGFKRDGIDRVLPIRA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaggaacccaccctgcgcgaggcatgccagggaaccccgccgctgtcggctcgt
ctggagccgtggatgcaggagctgctggcggaccctgcgacctgcagctcgctgctggag
cgctacggaagcccgctgaacgtgcacgacttttccgcgctgccgcgcaacgccgcagag
ctcacggaggtggccgagggctctggggtggacctgcggatctccgtggcacgcaaggcc
aacaagaccctcggcatggtgcgtgccgcgcatcgcgccgggctgggggtcgacgtgggc
agcgagcgcgagctgggccaggtgctcgaggccggtgtgccgccgcatgacgtggtggtc
accgcggccatcaagcccgatccggtgctgcgcctggccctggagtcccgctcactgctg
gtgctggacaacctcgacgaggtggccgcctcccggagggtcgccgagcaggtcaccggc
gcccggagcgcggaaccaggtcgccccgcggacggggcctctggtgcccccgagccgttc
cccgtggcgctgcgcctcgcgcccaagcccagcgacctgatcccgcccacccgcttcggg
gagtcggcccgcgcctggctcgagctgatcgactccggcggcctgggcgacctgctgcgg
gtggacggtgtgcacttccacctgcacggctatgacccgaccgcgcgcgccaccgccctc
ggggaggcgctggagctgatcgacgcgctgcgcgagcgcggcctggcccaggatggcgcg
ttcgtggacatcggcggcggcatcccgatgagctacctggacgatgccgagcagtgggac
gccttctggcaggcccacgagcggcaggccccggagtcgggcctcggcgggggtgctcgc
gcggccgacgacgaccggcccgcggctgcccccgacgccggcgaggacgcccccaccgcc
ccgctgacctggcgccgggaaccgctgcggcaggtgtacccctaccaccagcaggtgatc
cgcgggccctggctggagcggttcctgggccacgagatccgcccgggtgccactgccggg
caggccctgcgagagcgcggggtgcagctgcgctgcgagccgggccgctccatgatggac
ggttgcggcatgacgctggcgagggtcatccagcgcaccagtgccagcgacggcgtgccc
ctggtggggctggagatgaaccgcacccagtgccgctccacctccgacgacttcctggtg
gacccgatcctggtgcgcaccggcacacgcgacgatgccacggatccgtcggtcgccggt
gccgggcagagcagggcgagcgaacggttcgaggggttcctggtgggcgcctactgcatc
gaggccgagctgatcctgcgtcggcgcctcgcgttcccgcagggtgtggccgtgggcgat
gtgatcgccctgcccaacaccgccgggtacctgatgcacatcctggagagcgcgtcccac
cagatccccctggcctccaacgtggagcgcgtcggcggtggggaggcaggcggatccgga
ggtgaccaccccagcgcagaggtggcggaccgcagcaggatgggcggcacggaccacagc
agcaccgccgtcgaaggcagcgatccccgtcctgatgtgcccgggttcaagcgcgacggc
atcgaccgggtgctgcccatccgggcctga
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