Acidipropionibacterium acidipropionici ATCC 4875: PACID_05760
Help
Entry
PACID_05760 CDS
T02345
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo00521
Streptomycin biosynthesis
pbo00523
Polyketide sugar unit biosynthesis
pbo00525
Acarbose and validamycin biosynthesis
pbo00541
Biosynthesis of various nucleotide sugars
pbo01100
Metabolic pathways
pbo01110
Biosynthesis of secondary metabolites
pbo01250
Biosynthesis of nucleotide sugars
Module
pbo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PACID_05760 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PACID_05760 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PACID_05760 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PACID_05760 (rfbB)
00525 Acarbose and validamycin biosynthesis
PACID_05760 (rfbB)
Enzymes [BR:
pbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PACID_05760 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
adh_short
KR
Sacchrp_dh_NADP
Slo-like_RCK
Motif
Other DBs
NCBI-ProteinID:
AFV88417
UniProt:
K7S1K0
LinkDB
All DBs
Position
complement(652557..653555)
Genome browser
AA seq
332 aa
AA seq
DB search
MATLLVTGGAGFIGSNFVHRVLERTDSSVIVLDAMTYAANEASLAGLPADRFRLVRGSVC
DADLVDALVAEADAVVHFAAESHNDNSLEDPYPFVDTNIVGTFTLLQAIRRHGTRLHHIS
TDEVYGDLALDDPSRFTPTTRYNPSSPYSASKASSDMLVRAWARSYGVAATISNCSNNYG
PRQHVEKFIPRQITNIIDGLRPRLYGAGLNVRDWIHVDDHNAAVWTILEHGTPGETYLIG
ADGEMNNRDVIAMILELMGEPADAVDHVNDRPGHDLRYAIDSSKLRAELGWAPHYTSFRD
GLRATIDWYRGHEEWWRPMKRATEAGYARRGQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctccttgtcaccggcggagccggattcatcggcagcaacttcgtccaccgg
gtcctcgagcgcaccgactcctcggtgatcgtcctggacgccatgacctacgccgccaac
gaggccagcctcgccggcctgccggccgacaggttccggctggtgcgcggctcggtgtgc
gatgccgacctggtcgacgccctggtggccgaggctgacgccgtcgtccacttcgccgcc
gagtcccacaacgacaactcgctggaggacccttatccatttgtcgacacgaacatcgtc
ggcaccttcaccctcctccaggcgatccgccggcacggcacccggctgcaccacatctcc
accgacgaggtctatggcgacctggccctcgacgacccgtccaggttcacgcccaccacc
cggtacaacccctcctccccctactcggcgtccaaggcctcctcggacatgctggtgcgg
gcctgggcgcggtcctacggggtggcggcgaccatctcgaactgctcgaacaactacggg
ccccgccagcacgtcgagaagttcatccctcgccagatcaccaacatcatcgacggcctc
cgccccaggctctacggcgccggcctcaacgtccgcgactggatccacgtcgacgaccac
aacgcggcggtctggacgatcctggagcacggcacccccggcgagacctacctcatcggc
gccgacggcgagatgaacaaccgcgacgtcatcgcgatgatcctggagctcatgggcgag
ccggccgacgccgtcgaccacgtcaacgaccgccccggccacgacctgcgctacgccatc
gactcctcgaagctgcgcgccgagctcggctgggcgccccattacacgagcttccgcgac
ggattgcgcgccaccatcgactggtaccgcggccacgaggagtggtggcggccgatgaag
cgggccaccgaggccggctacgcccgcagggggcagtga
DBGET
integrated database retrieval system
