Acidipropionibacterium acidipropionici ATCC 4875: PACID_12830
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Entry
PACID_12830 CDS
T02345
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo00470
D-Amino acid metabolism
pbo00550
Peptidoglycan biosynthesis
pbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PACID_12830 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PACID_12830 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbo01011
]
PACID_12830 (murD)
Enzymes [BR:
pbo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PACID_12830 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbo01011
]
Precursor biosynthesis
Amino acid ligase
PACID_12830 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AFV89105
UniProt:
K7SIJ9
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All DBs
Position
1401845..1403332
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AA seq
495 aa
AA seq
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MGGGTMSSGVDLSRADRTFEWGRVHAVIAGLGTSGYASADALLELGATVTILDDSADDRH
RDEGGLMETLGAQVRLGPGSTAELPAGTDLVIVSPGWRPTQPLVARALATGVPVWGEPEL
AWRLMHPDRVVPWLAVTGTNGKTTTTQMTEAILKADGLKAAAVGNIGRSILEAMADEVDY
DVFAVELSSFQLHWSPSLSLHSAAVLNLHQDHLEWYADNPDPFAAYGADKARIYHRVQHS
AVYNVADPATERMVEQADVVEGARAIGFTLGIPGRSMLGVVDDMIVDRAFVEQRATSALE
LAALSDVHPFAPHNVENALAAAALTRSFGVHPRAVGQGLRDLHLGGHRIQTVHQAGGITW
VDDSKATNPHAANSSMRAFEHIVWIAGGQAKGTNFDHLVSNHAGKLRGAVVIGVDRATIA
ETLSRLAPEVPVVVLDSPDREVMAEAVRTAATMARPGDTVLMAPGCASLDIWPGYAARGD
DFAAAAREIDGPLQL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgggacaatgagctccggagtcgatctgagccgggccgacaggaccttcgaa
tggggccgcgtgcacgcggtcatcgcgggactgggcacctccgggtatgcctcggccgac
gccctgctcgagctgggcgcgacggtgacgatccttgacgactccgccgacgacaggcac
cgtgacgagggcggcctgatggagacattgggcgcacaggtgcgcctgggccccggcagc
accgccgaactgcccgccggaaccgacctggtgatcgtctcaccgggctggcgcccgacc
cagccgctcgtcgcccgcgccctggccaccggggtgcccgtgtggggggagcccgaactc
gcctggcgtctcatgcaccccgaccgggtggtgccctggctggcggtcaccgggacgaac
ggcaagaccaccaccacgcagatgacagaggccatcctcaaagccgacggcctcaaggcc
gccgccgtgggcaacatcggccgctcgatcctggaggccatggccgacgaggtcgactac
gacgtcttcgccgtggagctgtcgagcttccagctccactggtccccatccctgtccctc
cactcggcggcggtgctcaacctgcaccaggaccatctcgagtggtacgccgacaacccg
gacccgttcgccgcctacggcgccgacaaggccaggatctaccaccgggtgcagcactcc
gccgtctacaacgtggccgatccggccaccgagaggatggtcgaacaggccgacgtcgtg
gagggggcgcgggcgatcggcttcaccctgggcatcccggggcgctcgatgctgggcgtc
gtcgacgacatgatcgtcgaccgggccttcgtcgagcagcgggcgacctccgccctcgaa
ctggccgcgctgtccgacgttcaccccttcgccccccacaacgtggagaacgcgctggcc
gcggccgccctcacccgatccttcggggtgcatccccgggccgtcggacaggggctgcgg
gatcttcacctgggcggtcaccggatccagaccgtccaccaggccggcgggatcacctgg
gtggatgactccaaggccaccaatccgcacgccgcgaactcctcgatgcgcgccttcgag
cacatcgtctggatcgccggcgggcaggccaagggcaccaacttcgaccacctcgtctcc
aaccacgccggcaagctgcgcggcgcggtggtcatcggcgtcgaccgggccactatcgcc
gagaccctgtcccggctggcccccgaagtgcccgtcgtcgtgctcgactcgcccgatcgc
gaggtgatggccgaggccgtccgcaccgcggctaccatggcccggccgggcgacaccgtt
ctgatggcccctggttgcgccagcctcgacatctggccggggtacgcggctcgcggcgac
gacttcgccgccgcggcgcgagagatcgacggcccgcttcagctgtga
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