Acidipropionibacterium acidipropionici ATCC 4875: PACID_15190
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Entry
PACID_15190 CDS
T02345
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbo03009
]
PACID_15190
Enzymes [BR:
pbo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PACID_15190
Ribosome biogenesis [BR:
pbo03009
]
Prokaryotic type
ribosomal protein modification factors
PACID_15190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TraT
Motif
Other DBs
NCBI-ProteinID:
AFV89332
UniProt:
K7S429
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All DBs
Position
1638613..1640052
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AA seq
479 aa
AA seq
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MTDHLMTVHLVSMGCARNDVDAEELAARLEAGGFRLVDDPEHAETVMVNTCGFIEQAKKD
SVDTLLEAADLKAGGTTKSVVAVGCMAERYGAELAEALPEADAVLGFDDYQDISGRLQTI
LAGGSVEAHVPHDRRRLLPLSPAARADAAAGVSVPGIHTAPDLPASVTPSSGPRAATRRR
LGTGPSAPLKIASGCDRRCAFCAIPSFRGSYLSRPVAEIVEEARWLVDHGVREAFLVSEN
SSSYGKDLGDLRHMEKLVRELDRVDGLEWIRISYLQPAELRPSLIDAMLGTEKVVPYFDL
SFQHASGPLLRRMRRFGDAESFLGIIEGIRARCPEAGFRSNFITGFPGETEADVDVLVDF
LSSARLDVAGIFAYSDEEGTEGARLDEHLDDDVIAERRDRLADIVDETVAQRAEDRLGEC
APVLIEEVGDDGAIGRAPHQGPEVDGTVTLPEPAGAQVGDMVRARFIGSDGADLIGESV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccacctcatgaccgtgcacctggtgtcgatgggctgtgcccgcaacgacgtc
gacgccgaggaactggccgcccggctggaggccggcggattccgactggtcgacgacccg
gagcacgctgagacggtgatggtgaacacctgcggattcatcgagcaggccaagaaggac
tcggtcgacaccctcctggaggccgccgacctgaaggccggcggcaccacgaagtcggtg
gtggcggtgggctgcatggccgagcgctacggtgcggagctcgccgaggccctcccggag
gccgacgccgtgctcggcttcgacgactaccaggacatctccgggcgccttcagacgatt
cttgccggaggatcggtggaggcccacgtcccccacgaccggcgcaggctgctgcccctc
tcaccggccgcccgggccgacgccgcggccggggtctcggtgcccggtatccacaccgca
cccgacctgcccgcctccgtgacgccgagctccgggccccgcgccgccacccggagacgc
ctggggaccgggcccagcgcaccgctgaagatcgcttcgggctgcgaccgacggtgcgcc
ttctgcgcgatcccgagcttccgcggctcctacctgtcccggcccgtcgccgagatcgtc
gaggaggcccgctggctggtcgatcacggcgtgagggaggccttcctcgtctcggagaac
tccagctcgtacggcaaggacctgggggatctgcgacacatggagaagctggtgcgcgag
ctcgaccgcgtcgacggtctggaatggatcaggatctcctatctccagcccgcggagctg
aggccctcactgatcgacgccatgctgggtaccgagaaggtcgtgccctacttcgacctg
tccttccagcacgcgtcgggcccgctgctgcgtcggatgcgccgcttcggcgacgccgag
tccttcctgggaatcatcgagggcatccgtgcccggtgccccgaggcgggattccgctcc
aacttcatcaccggcttccccggggagaccgaggccgacgtcgacgtcctggtcgacttc
ctctcgtcggcccgcctggatgtggccgggatcttcgcctactccgacgaggagggcacc
gagggagcccggctcgacgagcacctggacgacgacgtcatcgccgagcgccgcgaccgt
ctggccgacatcgtcgacgagacggtggcccagcgggccgaggaccggctcggcgagtgc
gcacccgtgctcatcgaggaggtcggtgacgacggggcgatcggacgcgcacctcatcag
gggcccgaggtggacggcaccgtcacactgcccgaaccggccggggcacaggtgggcgac
atggtccgcgccaggttcatcggatccgacggggccgacctcatcggggagtccgtgtga
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