Acidipropionibacterium acidipropionici ATCC 4875: PACID_16150
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Entry
PACID_16150 CDS
T02345
Name
(GenBank) DNA gyrase/topoisomerase IV, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbo03032
]
PACID_16150
03400 DNA repair and recombination proteins [BR:
pbo03400
]
PACID_16150
Enzymes [BR:
pbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PACID_16150
DNA replication proteins [BR:
pbo03032
]
Prokaryotic type
DNA Topoisomerases
PACID_16150
DNA repair and recombination proteins [BR:
pbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PACID_16150
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
Motif
Other DBs
NCBI-ProteinID:
AFV89428
UniProt:
K7RWV1
LinkDB
All DBs
Position
complement(1716887..1719409)
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AA seq
840 aa
AA seq
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MARSTADDEFTENIIDVDVSSEMENSYLEYAYSVIYSRALPDARDGLKPVQRRILYTMGD
MGVRPDRPHVKSARVVGQVMGQLHPHGDSAIYDALVRMAQPWAMRLPLIDGHGNFGALDA
GPAAMRYTECRMAPAASAMIAGLDEDTVDFVPNYDGKETEPGVLPAAFPNLLVNGASGIA
VGMATNMPPHNLVEVVAALRHMLDHPDADLDAIMRFIPGPDLPTGGRIIGLDGIRDAYRT
GRGTFRIRATSTIERVSPRRQGIVVTALPYMVGPEKIIDQLKTLVQSKKITGIADVKDLT
DLANGTRLVIEIKNGINAEAMLQRLYRLTKLEDTFGINNVALVEGQPRTLGLMELLQVYL
DHRLDVTLRRTRFQLRKATDRLHLVEGLLTAILDIDDVIAIIRSSEDVGEARTRLMDAFD
LDEVQTNYILDMQLRRLTKLSRIELESERDDLRAEIDRLTRIVTDDRRLRKVVSQELAEI
AKSYGTPRRTVLLGSSGATEAAAGPLEVPDDPTWVLLSATGRIARIDTADGLPSTGPRAK
HDVIVSSARTTARGDFGVLTSTGRLIRARAIDLVDLPATANAPSLTGGTPVAELVQLEKG
EQVIAVTGLSGQGPALALGTRDGVVKRVNPEITGQDWWEVIALKGDDRVVGAAELDPDSP
EDTQLCFITESASLLHFSASLVRPQGRKGSGVAGIRSASPVIFFGAVPAADAVVVTGADD
TGETTGSASVKVTDLSRFPAKGRATGGVRCHRFLRTETRLLLAWAGRRPAVACGATGKPV
ELPDANDRRDGSGDQLPAPITAVASRGTGTEPGPETSSPSPDPVDRRPEQADQPDLFGDN
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcacgatcgaccgccgatgacgagttcaccgagaacatcatcgatgtggacgtctcc
agcgagatggagaacagctacctggagtacgcctactcggtgatctactcacgggcgctg
cccgacgcccgcgacggactcaaacccgtccaacggcggatcctctacaccatgggcgat
atgggcgtccgccccgaccggccccacgtgaagtcggcccgcgtggtcggccaggtgatg
ggccagctccatccccacggggactccgccatctacgacgccctggtgaggatggcccag
ccatgggcgatgcggctgccgctcatcgacggccacggcaacttcggtgccctggacgcc
ggccccgcggcgatgcggtacacggagtgccggatggctccggcggcctcggcgatgatc
gcgggcctggacgaggacaccgtcgatttcgtgccgaactacgacggcaaggagaccgag
cccggggtgctgccggccgccttcccgaacctgctggtcaacggcgcctcggggatcgcg
gtcgggatggccaccaatatgcctccccacaacctcgtggaggtggtcgccgcgctgcgg
cacatgctcgaccaccccgacgcagacctggacgccatcatgaggttcatccccggaccc
gaccttcccaccggcgggcggatcatcggtctggacgggatccgggacgcctaccgcacc
ggtcggggcaccttccggatccgggccacgagcaccatcgaaagggtgtcgccgcgccgt
cagggcatcgtcgtgaccgccctgccgtacatggtcggccccgagaagatcatcgaccag
ctcaagacgctggtgcagtccaagaagatcaccggcatcgccgacgtcaaggacctcacc
gacctcgccaacggcacccgactggtcatcgagatcaagaacggcatcaacgccgaggcg
atgctccagcggctctacaggctgaccaagctcgaggacaccttcggcatcaacaacgtc
gccctggtcgagggtcagccgcgcaccctcggactgatggagctgctgcaggtctacctt
gaccaccggctcgacgtcaccctgcgccgcacccgcttccagctgcgcaaggccaccgac
cgcctccacctggtggaggggctgctcaccgcgatcctcgacatcgacgacgtcatcgcc
atcatccggtcctccgaggacgtcggtgaggcgcggacccgcctcatggacgccttcgac
ctggacgaggtgcagaccaactacatcctcgacatgcagctgcgccgcctcacgaagctg
tcgcggatcgagttggagtccgagcgcgacgacctgcgggccgagatcgacaggctcacg
cggatcgtcaccgacgaccgcaggctgcgcaaggtggtctcccaggagctcgccgagatc
gccaagagctacgggaccccgcgccgcaccgtgctgctcggatcctcgggtgccactgag
gccgccgccggccccctcgaggtgcccgacgaccccacctgggtgctgctgtcggccacc
ggccgcatcgcccggatcgacaccgccgacggcctgccctccaccgggccgcgcgccaag
cacgacgtcatcgtgtcgtcggcgcgcaccacggcccgcggggatttcggcgtcctcacc
tcgaccggccggctcatcagggcccgggccatcgatctggtcgatctgccggccaccgcg
aacgccccgtcgctgaccggcggcacgcccgtggccgagctcgtccagctggagaagggc
gaacaggtcatcgcggtcaccggcctgtccggccagggcccggccctggcactgggcacc
cgcgacggcgtcgtcaagagggtcaatccggagatcaccggccaggactggtgggaggtc
atcgccctcaagggggacgaccgggtggtcggtgccgccgaactggatcccgactccccc
gaggacacccagctgtgcttcatcacggagtcggcgagcctgctgcacttcagcgcctcc
ctggtgcgcccccagggccgcaagggctcgggcgtggcgggcatcaggtccgcctcaccg
gtgatcttcttcggagcggtgccggccgccgacgcggtggtcgtcaccggtgccgacgac
accggggaaacgacggggtcggcgtcggtgaaggtgaccgatctgtcccgcttccccgcc
aaggggcgggccacgggaggggtgcggtgccaccgcttcctgcgcaccgagacccgcctg
ctgctggcctgggccggccgtcggcccgcggtggcctgcggagccacgggcaagcccgtc
gaactgcccgacgccaacgaccggcgcgacggctccggcgaccagctccccgctccgatc
accgccgtggcctcccgcggcaccggtaccgagcccgggccggagacatcctcgccctcc
cccgatccggtggacaggcgacccgagcaggctgatcagccggatctgttcggcgacaac
tag
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