Acidipropionibacterium acidipropionici ATCC 4875: PACID_16350
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Entry
PACID_16350 CDS
T02345
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbo03016
]
PACID_16350
Enzymes [BR:
pbo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PACID_16350
Transfer RNA biogenesis [BR:
pbo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PACID_16350
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AFV89448
UniProt:
K7RWW8
LinkDB
All DBs
Position
complement(1740150..1741406)
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AA seq
418 aa
AA seq
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MNESELPVLNAPAEGVPPLIATPDALDRAAELIASGTGPVAIDTERAHGYCYDTRAYLIQ
LRREGSGTHLVDPAALDPEGPGSGLGPLAEALEGTEWILHAATQDMPCLAREGLRPHRIF
DSELAGRLLGLPRVGLGPMVEQYFGVHLLKEHSAADWSTRPLPADWLVYAALDVELLIGL
RERLLADLAEAGKAGWAREEFEHLARIGAELPDHQPEPDPSRWRRTSGLHDVATRAGLEL
VKDLWWARETVARRVDIAPGRIVNDRAISALGVRCGDRVTLEPADLLGSSGFRRGRARRY
TEDWERALERARSTAESDYPPRRAPQEGPPPPRSWDRHHPDEAARWQAVRPAMNRRAEEL
ALPPENLISPDWLRRLAWRPPVDRSPAGVDAFLADLGARQWQRNLVCGELSRLLSGLR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagtccgagctgcccgtcctgaacgcccccgccgagggagtccccccgctcatc
gcgacccccgacgcgctggatcgcgccgcggagctcatcgcatcgggaaccggcccggtg
gccatcgacaccgaacgggcccacggctactgctacgacacccgggcctatctcatccag
ctgcgccgcgaggggtccggcacccacctggtggatccggccgctctggaccccgaggga
cccgggtcggggctgggcccgctggccgaggcactggagggcaccgagtggatcctgcac
gccgccacccaggacatgccctgcctggcccgggaggggctgcgcccccaccgcatcttc
gactccgagctggcgggacggctgctgggcctgccccgggtcggcctggggcccatggtc
gagcagtacttcggtgtccacctgctcaaggagcactccgcggcggactggtccacccgc
ccgctgcccgccgactggctggtctacgccgccctcgacgtcgagctgctcatcgggctg
cgcgagcgcctgctcgccgacctcgccgaggcaggcaaggccggctgggcccgcgaggag
ttcgagcacctggcccggatcggcgccgagctgcccgaccaccagcccgaacccgacccg
tcacgctggcggcgcaccagcggcctccacgacgtggcgacccgggccggcctcgagctg
gtcaaggacctgtggtgggcccgcgagacggtggcacggcgcgtcgacatcgcccccggg
aggatcgtcaacgaccgcgccatctcggccctcggggtccgctgcggcgaccgtgtgacc
ctggagccggccgatctgctgggatcctccgggttccggcgaggacgggccaggcgctac
accgaggactgggagcgcgccctggagcgggcccgcagcaccgccgagtccgactacccg
ccgcgcagggcgccgcaggaggggcccccgccgccccgctcctgggaccgccatcacccc
gacgaggcggcgcggtggcaggcggtgcgcccggccatgaaccggcgggccgaggagctc
gcccttcccccggagaacctcatctcccccgactggctccgccggctcgcctggcggccc
ccggtcgaccggtcccccgccggtgtcgacgccttcctggccgatctgggcgccaggcag
tggcagcgcaatctggtctgcggtgagctctcacgcctgctgagcggcctgcgctga
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