Acidipropionibacterium acidipropionici ATCC 4875: PACID_16780
Help
Entry
PACID_16780 CDS
T02345
Name
(GenBank) Uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PACID_16780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbo03400
]
PACID_16780
Enzymes [BR:
pbo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PACID_16780
DNA repair and recombination proteins [BR:
pbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PACID_16780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFV89486
UniProt:
K7RSV8
LinkDB
All DBs
Position
complement(1775979..1776815)
Genome browser
AA seq
278 aa
AA seq
DB search
MSALPHPRTGDLFESPVPPGTGWPGDPADASTPVATTGTQVADLALSAGDLGALDAVVSV
CRACPRLVSWRERVAVEKRASFADQPYWGRPVPSFGDARARLLVIGLAPAAHGANRTGRM
FTGDTSGDWLYAALNRAGLASTPGAVDARDGLELRGCRILSPVRCAPPANRPTVEERHTC
SAFLDRELALLPDARAALCLGAMAWTSLLAAARRIGWTVPRPAPRFGHGARARLLRPDAS
PLEMVGCYHVSRRNTSTGRLTVGMLDRALAQADRLSRA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgctctcccccatccgcgcaccggtgatctcttcgagtcccccgtgcccccgggc
acgggatggccgggcgaccccgccgatgcctcgacgccggtggccaccacggggacgcag
gtcgccgacctggcgctctcggcgggcgacctcggcgctctggacgccgtcgtgtcggtc
tgccgggcctgcccgaggctggtgtcctggcgggaacgggtcgccgttgagaagcgggcc
tccttcgcggaccagccctactgggggcgtccggtgccctccttcggtgacgcccgtgcc
cggctgctcgtgataggtctggccccggccgcccacggcgccaatcgcacgggtcggatg
ttcaccggcgacacgtcgggggactggctctacgccgcactgaaccgggccggtctggcg
agcacgccgggcgccgtcgacgcccgggacggtctggagctgcgcggctgccggatcctc
tccccggtgcgctgcgccccgccggccaaccgccccaccgtcgaggagaggcacacctgt
tcggcattcctggaccgggaactggccctgctgcccgatgcccgcgcggccctgtgcctg
ggggcgatggcctggacctccctcctggcggccgcccgccgcatcgggtggacggtgccg
cgcccggcgccgcggttcggccacggggcgcgcgcccggctgctgcgccccgacgcgtct
cccctggagatggtcggctgctatcacgtgagccgtcgcaacacctccacgggccggctg
accgtcggcatgctcgaccgggccctcgcgcaggccgatcgactgtcgcgggcctga
DBGET
integrated database retrieval system
