KEGG   Acidipropionibacterium acidipropionici ATCC 4875: PACID_17650
Entry
PACID_17650       CDS       T02345                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pbo  Acidipropionibacterium acidipropionici ATCC 4875
Brite
KEGG Orthology (KO) [BR:pbo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbo03400]
    PACID_17650
Enzymes [BR:pbo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PACID_17650
    5.6.2.6  RNA 3'-5' helicase
     PACID_17650
DNA repair and recombination proteins [BR:pbo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PACID_17650
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII AAA_25 DUF6406 Lhr_WH
Other DBs
NCBI-ProteinID: AFV89569
UniProt: K7RNJ7
LinkDB
Position
complement(1865387..1869994)
AA seq 1535 aa
MDDAMTMFREPVATWFRDVFAAPTPVQSATWTTVATGGHALVIAPTGSGKTLAAFLWALD
RLTDPDRKPSSGVGVLYISPLKALGSDIEKNLRAPLAGIRNTAERLGQGCRPVKVAVRTG
DTPPAERTRIAAHPPDILITTPETLYLMLTSSARRVLADVGTVIVDEVHAVAGSKRGSHL
ALSLERLDSLVGHDVQRIGLSATVRPPDDVAAFLAGDRPVTVVSPPAAKRWDVGVRVPVA
DMSDLPDSPPTDDSLLSDPLLTGGDTDTLAVDVSDSALPTRASIWPWIEHEVYAEVIAGR
STLVFVNARRTAERLTSRLNELWAAEHDPDSLNPGGRRPPADIMASSEEVGHAPAVIARA
HHGSVSKDERRRTEEDLRSGSLRCVVATSSLELGIDMGLVDRVIQIEAPPSVSSALQRIG
RAGHSVGAVSRGSVYPKTRLDLLHAAVVTSRMLDGRIEALHIPRNPLDVLAQQTVAATVA
APDGLRLADWYATVRRARPFADLPERAMDQVIAMLTGSYASADLSDLRARLVLENGVLTA
RPGALRLATTSGGTIPDRGLFGVFLAGEGEGRRVGELDEEMVYESRVGDVFTLGASSWRI
AEITRDQVRVTPAPGHTGRLPFWHGDDQGRPAELGRAIGEVTRRLHADPDLVETLDFLDD
HAAANITGFLDAQAEATGVLPDDRHIVMERFHDEVGDWRIVVHSPWGRPVNAAWALAIGA
RLGERLGIDAQAVAGDDGLVLRIPDTDSPPGADLLVFDPEEISDLVTSGVGDTALFAGRF
RECAARALLLPRTDPGRRAPLWQQRLRAGQLLEAVRGHRDFPIIVETVRECLADVYDMAA
LRTLMTDLASHRITVAEVTTGAPSPLASALMFNYTGAFMYSGDTPLAERRAAALSLDPEL
LGRLMGTLDLRELLDPGIIDEVVAELQHTRADRRARDDEGLVDLLARLGPVPVAELDART
ADGLDAGRAADRLGERVARVRIAGVEHLAVAQDLGLLRDGLGIPVPAGHAASGQGGRDPL
TQLVGRWARCHGPFTAEEAARAFGLGAATMSFVLERCASSGELVHGRFRDGVEASEYCHA
RVLSRIRGRALARARDQVAPASPSALTRFSMDWHRIGAQGLHGADGVMEALDALAGAALP
ASMWESAVLPARVADYRPAMLDELTASGDILVLPAGAGTSADPVLRLVRPEDAGLFPPPP
GAGPDEPSARVLEGIGSGSVLLGPLVAELGTSRLAELVWGLVASGLLAPDGFSPVRAHLA
GGRRRPSSRRRSYSRSRPRMARYAMTASAPGSGSVPPDLSGRWHAVDQHSRGASTPEQRL
TDAAGLLLDRFGILTRGSVPDDVEGGFAALYQVLARLEEAGKVMRGYLVEGLGGAQFAAP
AVIDRLRTFADGPDATGWPSGARDPRVEALAAVDPANPYGAALNWPEQDGVSPSRSAGAT
VVIADGLVLAHLSKGGRHLSLFIDALPEGISAETATGMVVDALADWLGRTGARALTVEKI
NGEPVHASALRAVMGAHGAGITPKGMRIEGTRARG
NT seq 4608 nt   +upstreamnt  +downstreamnt
gtggacgatgcgatgacgatgttccgggaaccggtggccacctggttccgcgacgtcttc
gccgcgcccaccccggtgcagtcggccacctggacgacggtggccaccggtgggcacgcg
ctggtgatcgcacccaccgggtcgggcaagaccctggccgccttcctctgggccctggac
cggctcaccgaccccgaccggaagccctccagcggcgtcggagtgctctacatctccccg
ctcaaggccctgggcagcgacatcgagaagaacctgcgcgcccccctggccggcatccgc
aacaccgccgagaggctcggccaggggtgccggccggtgaaggtggcggtgcgcaccggc
gacaccccgcccgccgagcgcacccgcatcgcggcccaccctcccgacatcctcatcacc
acccccgagaccctctacctcatgctcacctcctcggccagacgggtgctggccgacgtc
ggcaccgtcatcgtcgacgaggtgcacgccgtcgccgggtccaagcggggctcccacctg
gccctgtccctggagcgcctcgactcactggtgggccacgacgtccagcgcatcgggctg
tcggccaccgtccggccgcccgacgacgtcgccgccttcctggccggcgaccgcccggtg
accgtcgtctccccgccggccgccaagaggtgggacgtcggggtgagggttccggtggcc
gacatgtccgacctgccggactccccgcccaccgacgactccctgctgtccgaccctctt
ctgaccgggggagacaccgacaccctcgccgtcgacgtctccgactcggccctgccgacc
cgggcctccatctggccctggatcgagcacgaggtctacgcggaggtcatcgcggggcgc
tccaccctggtcttcgtcaatgcccggcgcaccgccgagcgcctcaccagccggctcaac
gagctgtgggccgccgagcacgatccggactcgctgaaccccggcggccggcgccctccc
gccgacatcatggcctcctccgaggaggtgggccacgccccggcggtgatcgcccgcgcc
caccacggatcggtgtccaaggacgagcgccggcgcaccgaggaggatctgcgctcggga
tccctgcgctgcgtggtggcgacctcctccctggaactgggcatcgacatgggcctggtc
gaccgcgtcatccagatcgaggccccgcccagcgtctccagcgccctgcagcggatcggg
cgggccggccacagcgtcggcgcggtctcccgcggatcggtctacccgaagacccgcctg
gacctgctgcacgccgccgtggtcacctcccggatgctcgacgggcgcatcgaggccctc
cacatcccccgcaaccccctcgacgtcctcgcccagcagaccgtcgccgccaccgtggcc
gcacccgacgggctgcggctggccgactggtacgccaccgtgcgccgcgccaggcccttc
gccgacctgccggaacgcgccatggaccaggtcatcgccatgctcaccggctcctacgcc
tcggccgacctgtcggacctgcgcgcccgcctcgtcctggagaacggcgtgctcaccgct
cgccccggcgccctgaggctggccaccacctcggggggcaccatccccgaccggggcctg
ttcggcgtcttcctggccggggagggggagggacgccgggtcggcgagctcgacgaggag
atggtctacgagtcccgggtcggcgacgtcttcaccctgggcgcctcctcctggcggatc
gccgagatcacccgcgaccaggtgcgtgtcacaccggcccccgggcacaccggcagactg
cccttctggcacggggacgaccagggccgccccgccgagctgggccgggccatcggcgag
gtcacccgccgactccacgccgacccggacctggtcgagaccctcgacttcctcgacgac
cacgccgccgccaacatcaccggtttcctggacgctcaggccgaggccaccggcgtcctc
cccgatgaccgccacatcgtcatggagcgcttccacgacgaggtcggtgactggcggatc
gtggtccacagcccgtgggggcgacccgtcaacgccgcctgggcgctggccatcggcgct
cgtctgggcgagcgcctgggcatcgacgcccaggccgtggccggggacgacggcctggtg
ctgcggatccccgacaccgactccccgccgggtgccgatctgctggtcttcgacccggag
gagatctccgatctggtgacctcaggggtgggggacaccgccctgttcgccgggcggttc
cgcgagtgcgccgcccgcgccctgctgctgccgcgcaccgacccgggacggcgcgcgccc
ctgtggcagcagcggctgcgcgccggacagctgctggaggcggtgaggggccaccgcgac
ttccccatcatcgtcgagaccgtgcgcgagtgcctggccgacgtctacgacatggcggcc
ctgcgcaccctgatgaccgacctggcatcccaccggatcacggtggccgaggtgacgacc
ggcgctcccagtccgctggccagcgccctcatgttcaactacaccggcgccttcatgtac
tccggcgacaccccgctggccgaacgccgcgccgccgccctctccctggacccggagctg
ctggggcggctgatgggcaccctggacctgcgcgaactgctggatcccggaatcatcgac
gaggtggtcgccgagctccagcacacccgcgccgaccgccgcgcccgcgacgacgaggga
ctggtggacctgctggcccggctcggtccggtgcccgtggcagagctggacgcccggacc
gccgacggcctggatgccggccgggccgccgaccggctgggggagagggtcgcccgggtg
aggatcgccggggtggagcacctggcggtggcccaggatctcggactgctgcgcgacggg
ctcggcatcccggtgccggccggtcatgccgcttccggccaggggggacgcgaccccctc
acccagttggtgggtcgttgggcccggtgccacgggccgttcaccgccgaggaggcggcc
cgcgcattcgggctgggggcggcgacgatgtccttcgtgctggaacgctgcgcatcctcg
ggcgagctggtgcacgggcgattccgcgacggggtggaggcctccgagtactgccacgca
cgggtgctgtcgcggatccgcggacgggcgctggcccgcgcccgcgatcaggtggcgccg
gcctcgccgagcgccctgacccggttcagcatggactggcaccggatcggggcgcagggc
ctgcacggcgccgacggcgtcatggaggccctcgacgcgctggccggggccgccctgccc
gcctcgatgtgggagtccgccgtgttgcccgcccgggtcgccgactaccgcccggcgatg
ctggacgagctcaccgcctccggcgacatcctcgtgctgcccgccggcgccgggacctcg
gccgaccccgtcctgaggctggtgcgtcccgaggacgccggcctgttcccgccgcccccc
ggggccggccccgacgagccgtcggcgagggttctggagggtatcggctccggttcggtg
ctgctgggaccgttggtcgccgaactgggcacatcccggctggccgaactggtgtggggc
ctggtggcatccggcctgctggcccccgacgggttctccccggtgcgcgcccatctggcg
ggcggacgccgccgcccgtcctcgcggcgccgctcctactcccggtcgaggcccaggatg
gcccgatacgcgatgacggcctcggcgccggggtcgggcagcgtcccgccggacctgtcg
ggacggtggcatgccgtggatcagcacagcaggggtgcctcgacccccgagcagcgcctc
accgatgccgcagggcttctcctggaccggttcggcatcctcacccgcggctcggtgccc
gacgacgtcgaaggtggattcgccgcgctctatcaggtgctggcccgcctcgaggaggcc
gggaaggtgatgcgcggctacctggtggagggcctgggaggggcgcagttcgccgccccg
gccgtcatcgaccggctgcgcaccttcgccgacggaccggacgccaccgggtggccgtcg
ggagcccgcgacccgcgggtcgaggcgctggcggcggtggatccggccaacccctacggc
gcggcgttgaactggcccgagcaggacggcgtctcaccctcccgcagcgcgggggcgacg
gtggtcatcgccgacggactggtgctggcgcatctgtcgaagggcggacggcacctgtcc
ctgttcatcgatgcgctgcccgaggggatcagcgccgagaccgcgaccggcatggtcgtc
gacgccctggctgactggctgggccgtaccggcgcacgagctctgactgtcgagaagatc
aacggagaacccgtgcacgccagcgcactgcgcgccgtgatgggtgcccacggtgcgggc
atcaccccgaagggcatgcggatcgaggggacccgtgcccgagggtga

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