Acidipropionibacterium acidipropionici ATCC 4875: PACID_18120
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Entry
PACID_18120 CDS
T02345
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo03030
DNA replication
pbo03430
Mismatch repair
pbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PACID_18120
03430 Mismatch repair
PACID_18120
03440 Homologous recombination
PACID_18120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbo03032
]
PACID_18120
03400 DNA repair and recombination proteins [BR:
pbo03400
]
PACID_18120
Enzymes [BR:
pbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PACID_18120
DNA replication proteins [BR:
pbo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PACID_18120
DNA repair and recombination proteins [BR:
pbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PACID_18120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AFV89616
UniProt:
K7RT75
LinkDB
All DBs
Position
complement(1920264..1923833)
Genome browser
AA seq
1189 aa
AA seq
DB search
MARSDFVHLHTHTEYSMLDGAASNDKLFAEVARQGMPAVAMTDHGNMFGAYEFYQLSKKY
DGTENPLVKPIIGIEAYVAPSSRFSKVQEFWGGRRDNGDPDAEGGKDVSGGGRYTHMTMW
AKNPTGLHNLYRLSSLASYEGYYMKPRMDRELISQYAAGVIGSTGCPSGEVQTRLRLGQF
DEACEAAAAYQEIFGAENYFCELMDHGVPIEREVRADLLRLAEKLKIPLLVTNDSHYVTE
DQADAHDSLLCVGVGRNKDDPNRFRFNGSGYYIKTSEEMRALFPDHPEACDNTLRLTEMI
EPYDDVFAYVDRMPQFDVPEGETQESWLRKKLQKGLDEKYGPNPPQAVLERVETELATIE
PLGFSSYFLVVSDICDAARSMGVPVGPGRGSAAGSMVAYLTGIIQIDPLEHGLLFERFLN
PERVNPPDIDLDFDDRQRDKVIDYVTHKYGDEYTSQVNTFGKIKAKNAVKDANRILGYPF
ALGDKITKAMPPDVMGKGVPLSKIFDPEDARYNEGGEFRALYEENPDVHKVVDTAKGLEG
LIRGTGVHACAFILSSAKLLDLVPMHKRDKDGMIIAGFAYPQLEEMGLMKMDFLGLRNLG
IMDHCLKIIKANRGEDVDLQKLPLDDQNTYELLARGDTLGVFQLDGTAMRSLLRLMGPTN
FDDIIAVIALYRPGPMGANAHINYAERKNGRQDIIPIHPELKEDLDEILAPTYHLIVYQE
QIMSIARKLAGYTLGGADLLRRAMGKKKKYILDQNFVPFQAGMRKNGYSDKAIQALWDVM
VPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYGAALLTSVGDDKDKMALYLSDMRAQH
INVLPPDVNASSLAFTAVGTDIRFGLGAIRNVGEHLVDKMIEARDEYGPAHDFFEFLDHM
PLEVCNKRAIESLIKAGAFDSMGHSRRGLMNIFEQAVDAVIDLKRNEANGQDDLFGMGGG
GDEPAQLGVERVVPEEDWDKRTKLAFERDMLGLYVSDHPLHGLESALEAERDISIASIIS
PEGPREGQFTIAGMVTQITRRTTKNGDVWASVTIEDLDAAITVACFPKVYQRVEPLLALD
TILKIRGRVRERDESAEMSASDIWVLDLAEAGHAPITIAVRSGRCTPAVVGDLRGVLRSH
PGASEVRLRLIDGQRSTTFRLADELKVTTDQPLMADLKALLGPSCIPGR
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
gtggcacggtccgacttcgtccacctgcacacccacaccgagtactcgatgctcgacggt
gctgccagcaacgacaaactcttcgccgaggtggcacgccagggcatgcccgccgtggcg
atgaccgaccacggcaatatgttcggggcctacgagttctaccagctctccaagaagtac
gacggcaccgagaatccgctggtcaaacccatcatcgggatcgaggcctatgtggcccct
agcagccgcttctccaaggtgcaggagttctggggcgggcgtcgcgacaacggcgatccg
gacgccgagggcggcaaggacgtctcgggcggtggccgctacacccatatgacgatgtgg
gcgaagaaccccaccggcttgcacaacctctaccggctgtcctccctggcctcctacgag
ggctactacatgaagccccggatggaccgcgagctcatcagccagtacgccgccggcgtc
atcggatccaccggatgcccctcgggggaggtgcagacccggctgcgcctgggccagttc
gacgaggcctgcgaggccgccgccgcataccaggagatcttcggcgcggagaactacttc
tgcgagctcatggaccacggcgtccccatcgagcgcgaggtacgggccgacctgctgcgc
ctggccgagaagctcaagatcccgctgctggtcaccaacgactcccactacgtcaccgag
gaccaggccgacgcccacgactccctgctgtgcgtgggcgtgggccgcaacaaggacgac
cccaacaggttccgcttcaacggctcgggctactacatcaagacctccgaggagatgcgg
gcgctgttccccgaccatcccgaggcctgcgacaacaccctgcggctcaccgagatgatc
gagccctacgacgacgtcttcgcctacgtcgaccggatgccccagttcgacgtcccggag
ggggagacccaggagtcctggctgcgcaagaagctccagaaggggctcgacgagaagtac
ggccccaacccgccccaggcggtcctcgaacgcgtcgagaccgagctggcgaccatcgag
ccgctgggcttctcctcctacttcctggtggtctccgacatctgcgacgccgcccggagc
atgggtgtgcccgtcggcccgggccgaggatccgccgccggctcgatggtggcctacctc
accgggatcatccagatcgacccgctggagcacggcctgctgttcgagcgcttcctcaat
cccgagcgcgtcaatccgcccgatatcgacctggacttcgacgaccgccagcgcgacaag
gtcatcgactacgtcacccacaagtacggcgacgagtacaccagccaggtcaacaccttc
ggcaagatcaaggccaagaacgccgtcaaggacgccaaccggatcctcggctaccccttc
gccctgggcgacaagatcaccaaggcgatgccccccgacgtcatggggaagggggttccg
ctgtcgaagatcttcgaccccgaggacgcccgctacaacgagggcggggaattccgcgcc
ctctacgaggagaatcccgacgtccacaaggttgtcgacaccgcgaagggcctggaaggc
ctgatccgcggcaccggcgtccacgcctgcgccttcatcctctccagcgccaaactgctc
gacctcgtcccgatgcacaagcgggacaaggacggcatgatcatcgccggcttcgcctat
ccccagctcgaggagatggggctcatgaagatggacttcctgggcctgcggaacctcggc
atcatggaccactgcctcaagatcatcaaggccaaccgcggcgaggacgtcgacctgcag
aagctgcccctcgacgaccagaacacctacgagctgctggcccgcggcgacaccctcggc
gtcttccagctcgacggcacggccatgcgctccctgctgcgcctcatggggcccaccaac
ttcgacgacatcatcgccgtcatcgccctgtaccggcccggcccgatgggcgccaacgcc
cacatcaactacgccgagcgcaagaacggccgccaggacatcatcccgatccaccccgag
ctcaaggaggacctcgacgagatcctcgccccgacgtaccacctcatcgtgtaccaggag
cagatcatgtcgatcgcccgcaagctggcgggctacaccctgggcggcgcagacctgctt
cgccgtgccatgggcaagaagaagaagtacatcctggaccagaacttcgtgcccttccag
gccgggatgcgcaagaacggctactccgacaaggccatccaggccctgtgggacgtcatg
gtgccgttcgccggatacgccttcaacaagtcccacgccgccggctacgggctggtctcc
tactggacggcctacctgaaggccaactatccggccgagtacggcgccgcgctgctcacc
agcgtcggcgacgacaaggacaagatggccctctacctgtcggacatgagggcccagcac
atcaacgtgctgcctcccgacgtcaacgcatcctcgctggccttcaccgccgtcgggacc
gacatccgcttcggcctgggggcgatccgcaacgtcggcgagcacctggtcgacaagatg
atcgaggcccgcgacgagtacggcccggcccacgactttttcgagttcctcgaccacatg
cccctggaggtgtgcaacaagagggccatcgagtccctcatcaaggccggggcgttcgac
tcgatgggccattcccggcgcgggctcatgaatatcttcgagcaggccgtcgacgccgtc
atcgacctcaagcgcaacgaggccaacggccaggacgacctgttcgggatgggcggggga
ggcgacgagcccgcccagctgggcgtcgaacgcgtcgtccccgaggaggactgggacaag
cgcaccaagctcgccttcgagcgcgacatgctgggcctctacgtctccgaccatccgctg
cacggtctggaatcggccctggaggccgagcgcgacatctcgatcgcctcgatcatctcc
cccgagggcccccgggaggggcagttcaccatcgccggaatggtcacccagatcacccgg
cgcaccaccaagaacggcgacgtgtgggcctcggtcaccatcgaggacctggacgccgcg
atcacggtggcctgcttcccgaaggtctaccagcgggtcgagccgctgctggccctggac
accatcctcaagatccgcggccgggtgcgggagcgcgacgagagcgccgagatgtcggcc
tccgacatctgggtgctggatctggcggaggccggtcatgccccgatcaccatcgcggtg
cgcagcgggcggtgcaccccggccgtcgtgggggacctgcgcggtgtgctgcgctcccac
ccgggagcctcggaggtgaggctgcggttgatcgacggccagcggtcgaccaccttccgg
ctggccgatgagctcaaggtgaccaccgaccagccgttgatggccgatctcaaggccctc
ctggggccctcctgcattccggggcgctga
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integrated database retrieval system
