Acidipropionibacterium acidipropionici ATCC 4875: PACID_19680
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Entry
PACID_19680 CDS
T02345
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PACID_19680 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbo03021
]
PACID_19680 (rho)
03019 Messenger RNA biogenesis [BR:
pbo03019
]
PACID_19680 (rho)
Transcription machinery [BR:
pbo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PACID_19680 (rho)
Messenger RNA biogenesis [BR:
pbo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PACID_19680 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFV89767
UniProt:
K7S567
LinkDB
All DBs
Position
complement(2085045..2087066)
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AA seq
673 aa
AA seq
DB search
MTSSTQNGGSTGDLSSKLLPELRSIGTQMGIKGARTMRKADLVSAIKAGGFVQASARSGE
PRSRRAPRAAAATDTATPPKAENSTAPKADNNAAPKAESRTAPTADNNAAPASRNQEELP
TGSGQAETSRPSRARGTDQDRPRRRNNAQPRSEDAAQAGAGEDRSESQHGGPNHQDSTHQ
ESNRNRRRRNQPRHNFDEAVAESPSAEVNNEVGARLEALSQQAGHQGGGESRRSEGRTES
RSEPRHEDLGGTGSDDDFGNGRRSRRRRQRDRQNRRNKRGPEQRYSGNDSDPNVREDDVL
VPCSGILDIRDQYAFVRTSGYLPGPNDAYVSMNMVRKHGLRRGDVVTGALRAKREGERRE
KFAPLVRLDTVNGVDPEQMRSRAEFSKLTPLYPQERLRLETDAKNMTGRIIDLVSPIGKG
QRGLIVSPPKAGKTMIMQSIANSITRNNPEVHLMVVLVDERPEEVTDFERTVSGEVIAST
FDRPADDHTQLSELAIERAKRLVELGHDVVVLLDGITRLGRAYNLAAPASGRILSGGVDS
AALYPPKKFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLRREFAN
KRLFPAIDVDASGTRREELLLSREETAIMWKLRRVLSGLDGSQALEMMLSKLRKTQTNLE
FLYAISKTTPSAD
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagttccacccagaacggcggatccaccggggatctgtcgagcaagcttctgccc
gaactgcggtccatcgggacccagatgggcatcaagggtgccaggacgatgaggaaggcc
gatctcgtctcggccatcaaggccggtggcttcgtgcaggcctccgcccgctccggcgag
ccgcgctccaggcgggcgccgagggccgctgccgccacagacaccgccaccccgccgaag
gccgagaacagcaccgcgccgaaggccgacaacaacgccgcgccgaaggccgagagcagg
accgcgccgacggccgacaacaacgccgcaccggcttcgaggaaccaggaggagctgccg
accggatcgggccaggccgagacctcgcgcccctcccgggcccgcgggacggaccaggac
cggccgcgccgtcgcaacaatgctcagccgcgttccgaggacgccgcgcaggccggagcc
ggcgaggaccgctccgagagccagcacggtgggcccaaccaccaggactcgacccatcag
gagtcgaaccgcaaccggcgccgtcgcaaccagccgcgtcacaatttcgacgaggccgtg
gccgagtccccctcggccgaggtgaacaacgaggtcggcgcccgcctggaggcgctctcc
cagcaggccggccaccagggcgggggagagagccgacgctccgagggccgcaccgagtcg
cgcagcgagccccgtcatgaggatctcggcggcacgggttccgatgacgacttcggcaat
ggtcgcaggtcccgcaggcgccgtcagcgcgaccgccagaaccgccgcaacaagcgcggt
ccggagcagcgctactccgggaacgactcggaccccaatgtccgcgaggacgacgtcctg
gtgccctgctcgggcatcctcgacatccgcgaccagtacgccttcgtgcgcaccagcgga
tacctgcccggccccaacgacgcctacgtctcgatgaacatggtccgcaagcacgggctg
cgcaggggagacgtggtcaccggtgcgctgcgtgccaagcgcgagggggagaggcgtgag
aagttcgcccccctggtgcgcctggacacggtcaacggcgtcgatcccgagcagatgcgc
agtcgcgccgagttctccaagctgaccccgctgtacccccaggagaggctgcgtctggag
accgacgcgaagaacatgaccggccggatcatcgacctggtcagtccgatcggcaagggc
cagcgcggcctcatcgtctctccgcccaaggcgggcaagacgatgatcatgcagtcgatc
gccaactcgatcacccggaacaatccggaggtccatctcatggtggtcctggtcgacgag
cgtcccgaggaggtcaccgacttcgagcggaccgtctccggggaggtcatcgcctccacc
ttcgaccgtcccgccgacgaccacacccagctctccgagctggccatcgagagggccaag
aggctcgtcgagctcggtcacgacgtggtggtcctgctggacggcatcacccgtcttggg
cgcgcctacaacctggcggcaccggcctcgggacggatcctgtcgggcggcgtggactcc
gcggccctctacccgccgaagaagttcttcggcgccgcccgcaacatcgagaacggcggt
tcgctgaccatcctggccaccgccctggtggagaccgggtcgaagatggacgaggtgatc
ttcgaggagttcaaggggacgggcaactcggagctgcggctgcgccgcgagttcgccaac
aagcgcctcttcccggccatcgacgtggacgcctccggcacccgccgcgaggagctgctg
ctgtcgcgcgaggagaccgcgatcatgtggaagctgcgccgggtgctctcggggctcgac
ggctcccaggcccttgagatgatgctgtccaagctgcgcaagacccagacgaatctggag
ttcctctacgcgatctcgaagaccaccccctcggccgactga
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integrated database retrieval system
