Acidipropionibacterium acidipropionici ATCC 4875: PACID_20070
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Entry
PACID_20070 CDS
T02345
Name
(GenBank) Exonuclease V, alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PACID_20070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbo03400
]
PACID_20070
Enzymes [BR:
pbo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PACID_20070
DNA repair and recombination proteins [BR:
pbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PACID_20070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
RecD_N
AAA_22
Helicase_RecD
TraI_hel_assoc_N
UvrD-helicase
SH3_13
PhoH
SLFN-g3_helicase
AAA_16
nSTAND3
UvrD_C
CbiA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AFV89802
UniProt:
K7S5A9
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All DBs
Position
2134211..2136139
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AA seq
642 aa
AA seq
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MPDLIPVAAGHLAPFCRTGVLEAADVHLARLICRAGGEPSPDVELAAALTVRELRLGSVQ
MDPATIRRDVARQILDPAVVAAAGPGELAALEEFKALSWPDPSAWLEELGVSPAVAGPMA
PANRRALRLDEGILHLERYWQDEQQVAQLMAGLADDPPDELSDHLVEAAVKSVGGALRQA
GTVLDPAQIQAAERACRHRLTVLAGGPGTGKTTTVCTILAVLARAAGDPGPVRLAAPSGK
AAARLRDAVGQVAAGLPEEFRPASVEATTVHALLGSRGPGRGFSHDARNPLAAGVVIVDE
ASMLSLPMAARLLEAVGPSTRLVLVGDPGQLVSVDAGSVLADVVASASGLGPERLPVTTL
TSNHRSGGAIARLAEAVRRGDQDAVMAVLDGDDSTVGFIDADAAGVGLQDLPEVAEQIRS
VAADTLEAVNRGDDEEALRLVDEHRLLCAHRQGPYGVEAWSRQMDSALSEALPGLGRGRW
VVGEPVIVNRNMRQLEINNGDCGVVVTEDPVPTVVLPGGSGAPRRLPCALVASLRPLQAM
TVHKAQGSQFNRVTVILPPPDSPLLTRELIYTAITRARRGLTVVGTRESVSRAVAQPSRR
RSGLARLWERRSQRDRQVGAGLGDGQAVGEPGLDEAAGDGHR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgatctcatcccggtggcagctggacatctggcccccttctgccgcaccggcgtg
ctggaggccgccgatgtccacctggcccgactcatctgccgggccggcggggagccctcc
cccgacgtcgagctcgccgccgccctgaccgtcagggagctgcgactcggatctgtccag
atggatccggcgaccatccgccgggacgtcgcccgtcagatcctcgacccggccgtggtg
gccgccgccggccccggggagctggccgccctcgaagagttcaaggccctgtcgtggccc
gatccgtccgcctggctcgaggaactgggggtcagcccggcggttgcgggcccgatggcc
ccggccaaccggcgggccctgcgactcgacgagggcatcctccacctcgagcggtactgg
caggacgagcagcaggtggcccagctgatggccggcctggcggacgaccctcccgacgag
ctctccgatcacctcgtcgaggccgccgtcaaatcggtgggtggcgccctgaggcaggcc
ggcaccgttctggaccccgcccagatccaggccgcggagcgggcctgccggcaccgcctc
accgtcctggcgggaggaccgggcaccgggaagacgaccacggtctgcacgatcctcgcg
gtgctcgcccgggcggccggcgatccggggccggtccggctggcggctcccagcggaaag
gccgcagccaggctgcgagacgccgtcggccaggtggcggccggcctgcccgaggaattc
cggcctgcctccgtcgaggccaccacggtgcatgcgctcctcgggtcccgggggcccggc
agaggcttcagccacgacgcccgcaaccccctggcggccggggtggtgatcgtcgacgag
gcgtcgatgctgtccctgccgatggccgcccggctgttggaggccgtcggcccctcgacc
aggctggtgctggtcggcgatcccggccagctcgtctcggtggacgccggcagcgtcctg
gccgacgtcgtcgcctccgcctcgggtctgggccccgagcggctgccggtcaccaccctc
accagcaatcaccgctccggcggcgccatcgcccggctcgccgaggcggtgcgccgcggg
gaccaggatgcggtgatggccgtgctcgacggcgacgactcgacggtgggattcatcgac
gcggatgcggccggcgtcgggctgcaggatcttcccgaggtggccgagcagatccggtcg
gtggccgccgacaccctcgaggcggtgaaccgcggcgacgacgaggaggccctgaggctg
gtggacgagcaccggctgctgtgcgcccaccgtcaggggccctacggggtcgaggcgtgg
tcccgacagatggactccgccctgtcggaggccctgcccgggctgggccggggccgctgg
gtggtcggcgagccggtcatcgtcaaccggaatatgcgccagctggagatcaacaacggc
gactgcggggtcgtggtgaccgaggatccggtgcccaccgtcgttctgccgggcggctcg
ggtgccccgcggcgactgccctgcgccctggtggcgtcgctgcgtccccttcaggcgatg
accgtccacaaggctcagggctcccagttcaaccgtgtgacggtgatcctgccccctccc
gactcgccgctgctgacccgggagctgatctacaccgccatcacccgggccagacgcggc
ctgacggtggtgggcacccgcgagtcggtgagccgtgcggtggcccagccgtcccgacga
cgctcagggctggcccggctctgggagcgccgctcccagcgggaccgacaggtcggcgcc
ggactcggggacgggcaggcggtcggcgagccaggcctcgatgaggctgcgggcgatgga
catcggtga
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