Acidipropionibacterium acidipropionici ATCC 4875: PACID_21730
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Entry
PACID_21730 CDS
T02345
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbo03016
]
PACID_21730 (truB)
Enzymes [BR:
pbo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PACID_21730 (truB)
Transfer RNA biogenesis [BR:
pbo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PACID_21730 (truB)
Prokaryotic type
PACID_21730 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AFV89959
UniProt:
K7RPM8
LinkDB
All DBs
Position
complement(2307516..2308403)
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AA seq
295 aa
AA seq
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MRLMESGLLIVDKPQGWTSHQVVARVRRLRGTRKVGHAGTLDPMATGVLVVGVGRATRLL
GHLALHDKDYTATIRLGVTTVTDDAEGDVLAAEDASGLTEAGIGEAMAPLRGDILQVPTA
VSAIKVNGQRAYKRVRAGEDVVLEPRPVTVSRFEAVGMRHDGQAVDVDVEVTCSSGTYVR
ALARDLGEALGVGGHLTALRRTRIGPYALGEVPVDLAEDAARPRLMTMADAARLSFPVVV
LEAAQEADLRVGKRLEIVVPADPTAMISAATGELLALYRPDAERPGWSRAVAVLV
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcatggaatcgggcctgctgatcgtcgacaaaccccagggctggacctcccat
caggtggtcgcccgggtgcgccggctgcgcggcacccgcaaggtgggccacgccgggacc
ctggacccgatggccaccggggtgctcgtggtgggggtgggccgggccacccggctgctg
ggccacctggccctccacgacaaggactacaccgcgacgatccggctcggcgtcaccacg
gtcaccgatgacgccgagggagacgtcctggcggccgaggacgcctcgggactgaccgag
gccggcatcggcgaggccatggctccgctgcggggcgacatcctccaggtgccgaccgcc
gtgagcgccatcaaggtgaacgggcagcgggcgtacaagagggtgcgcgccggcgaggac
gtggtgctggagcccaggccggtgacggtgtcgcggttcgaggcggtcggaatgcgccac
gacgggcaggcggtcgacgtcgatgtcgaggtgacctgctcgtcgggcacctatgtgcgc
gccctggcacgggatctgggggaggcgctgggggtcggcggccatctgaccgccctgcga
cgcacccggatcgggccctatgccctgggtgaggtgcccgtcgatctggccgaggacgcc
gcccgtccgcgtctcatgacgatggcggacgccgcccgtctcagtttcccggtggtcgtg
ctggaagccgcccaggaggccgacctgcgggtcgggaagagactggagatcgtcgtcccc
gccgatccgacggcaatgatctcggcggccaccggggagctcctggccctgtaccggccc
gatgccgagcgccccggctggtcacgggcggtcgccgtgctggtgtga
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