Acidipropionibacterium acidipropionici ATCC 4875: PACID_23190
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Entry
PACID_23190 CDS
T02345
Name
(GenBank) AMP-binding enzyme
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo00061
Fatty acid biosynthesis
pbo00071
Fatty acid degradation
pbo01100
Metabolic pathways
pbo01212
Fatty acid metabolism
pbo02024
Quorum sensing
pbo04146
Peroxisome
Module
pbo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PACID_23190
00071 Fatty acid degradation
PACID_23190
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PACID_23190
09145 Cellular community - prokaryotes
02024 Quorum sensing
PACID_23190
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pbo01004
]
PACID_23190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbo04147
]
PACID_23190
Enzymes [BR:
pbo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PACID_23190
Lipid biosynthesis proteins [BR:
pbo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PACID_23190
Exosome [BR:
pbo04147
]
Exosomal proteins
Exosomal proteins of breast milk
PACID_23190
Exosomal proteins of breast cancer cells
PACID_23190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFV90101
UniProt:
K7RUK5
LinkDB
All DBs
Position
complement(2458800..2460716)
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AA seq
638 aa
AA seq
DB search
MTTDTLAVREELLARSARNLGDMLRRRVDQTPDAVAFWYPENKTYGPEQWTPVSWSQIQQ
DAHEVAAGLLDLGLEREQRVAICADTTLDWIRTDLGIACAGGATTTVYANSNPEDVEYIV
TASQSTIYVAQNSEQAIKVIGRPALDGQLRRIILVDDDRLIQGAPNSPRRTVAEDRRVMS
LAELRERGWKRRRRDPGCVQRVIDVVTPASLSTLIYTSGTTGKPKGVELPHRAWTYMGVA
MESWDPLEPGDLQYLWLPLAHVFGKCLLAVQITIGFASAVDGRVDRIVTGMGEVHPTFMC
GVPRIFEKVRAKVLTAGGLAGRISSWAFKVGSESAPYRLDDRPMPKGLAARQLVAEKLVF
SKLKKTMGGRIRMMIAGGAKLSPQVQRWFFAAGIPVVEGYGSTETSAIAFFNVPKKGRFG
PRFGTVGLVCPGIEARIAEDGEVLVRGPIVANGYHDDPERTRESFEDGWFHTGDIGHFDE
LDHLVVTDRKRDMIKTSGGKYIAPQHVESTLMGTCPYLSQAVVVGEGHKYAVALLTLDHD
SLMAWGSRHGRAEKSYQQLSQEPEIRASIQRYVDRANTHLERWETIKKFTILDHELDGDR
GLVTENMKVRRGKVIDEYAEEISAMYDDEQSVPFDGED
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgacacgcttgccgttcgggaggaactgctggcgcgaagcgcccgcaacctc
ggcgacatgctccggcgacgggtcgaccagaccccggacgcggtggccttctggtacccg
gagaataagacctacggccccgagcagtggacgccggtcagctggagccagatccagcag
gacgcccacgaggtggccgccggtctgctggacctgggccttgagcgcgagcagcgggtg
gcgatctgcgccgacaccacactggactggatccgcaccgacctggggatcgcctgcgcg
ggcggcgccaccacgaccgtctacgccaactcgaaccccgaggacgtcgagtacatcgtc
accgcctcgcagtcgaccatctacgtcgcccagaacagcgagcaggccatcaaggtgatc
ggccggcccgccctggacgggcagctgcgccgcatcatcctggtcgacgacgaccgtctc
atccagggggcgccgaactctccccgccgcaccgtggccgaggaccgccgggtgatgtcc
ctggccgagctgcgagagcgtggctggaagcgtcgccgtcgcgatccgggatgcgtccag
cgggtcatcgacgtcgtcaccccggcatccctgtccaccctcatctacacctcgggaacc
accgggaagcccaagggggtcgagctgccgcaccgcgcctggacgtacatgggcgtcgcg
atggagtcctgggatcccctggagcccggcgacctgcagtacctgtggctgcccctggca
cacgtcttcggcaagtgcctgctggcggtccagatcaccatcggcttcgcctcggcggtc
gacgggcgggtcgaccgcatcgtcaccggcatgggggaggtgcaccccaccttcatgtgc
ggtgtgccgaggatcttcgagaaggtccgcgccaaggtcctcacggccggcggcctggcc
gggcgcatctcctcctgggctttcaaggtgggatccgagagtgcgccctaccggctcgac
gaccggccgatgcccaaggggctggcggcccgtcagctggtcgccgagaaactggtgttc
tccaagctcaagaagaccatgggcgggcggatcaggatgatgatcgccggcggcgccaag
ctgtcgccccaggtgcagcgctggttcttcgcggccggtatcccggtggtggagggctac
ggatccaccgagacctcggccatcgccttcttcaacgtgcccaagaagggccggttcggc
ccccgcttcggcaccgtgggcctggtctgccccggcatcgaggcacggatcgccgaggac
ggggaggtcctggtacgcggcccgatcgtcgccaacggctatcacgacgatccggagcgg
acccgcgagtccttcgaggacgggtggttccacaccggcgacatcgggcacttcgacgag
ctcgaccacctggtcgtgaccgaccgcaagcgcgacatgatcaagacctccggcggcaag
tacatcgccccccagcacgtggagtccacgctgatgggcacctgcccgtacctgtcccag
gccgtcgtggtgggggaggggcacaagtacgcagtcgccctgctcaccctggaccacgac
tcgctgatggcctggggatcgcgccacggccgtgccgagaagtcctaccagcagctcagc
caggagccggagatcagggcgtcgatccagcgctacgtcgaccgggccaacacccacctg
gagcggtgggagacgatcaagaagttcaccatcctcgatcatgaactggacggtgaccgg
ggcctggtgacggagaacatgaaggtgcgccggggcaaggtgatcgacgagtacgccgag
gagatctcggcgatgtacgacgacgagcagtccgtacccttcgacggggaggactga
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