Acidipropionibacterium acidipropionici ATCC 4875: PACID_23200
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Entry
PACID_23200 CDS
T02345
Name
(GenBank) AMP-binding enzyme
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo00061
Fatty acid biosynthesis
pbo00071
Fatty acid degradation
pbo01100
Metabolic pathways
pbo01212
Fatty acid metabolism
pbo02024
Quorum sensing
pbo04146
Peroxisome
Module
pbo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PACID_23200
00071 Fatty acid degradation
PACID_23200
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PACID_23200
09145 Cellular community - prokaryotes
02024 Quorum sensing
PACID_23200
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pbo01004
]
PACID_23200
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbo04147
]
PACID_23200
Enzymes [BR:
pbo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PACID_23200
Lipid biosynthesis proteins [BR:
pbo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PACID_23200
Exosome [BR:
pbo04147
]
Exosomal proteins
Exosomal proteins of breast milk
PACID_23200
Exosomal proteins of breast cancer cells
PACID_23200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFV90102
UniProt:
K7S628
LinkDB
All DBs
Position
complement(2460762..2462627)
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AA seq
621 aa
AA seq
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MSLLEDLEDRSARSFGALLDRQADEHPDRIAFLIPQGDDDRENTWVPMTFAEFRRQAHAV
AAGLLGLGLGREQRVAIMSGTRTEWIIADMGISCAGGATTTVYPNTNAEETAFILTDSDS
QIVFIDTVAQLEKIRSRPELDSHVRAIILFDESERAEAAGGSVDERVMSMADLIADGRRR
LAARPDLVRRVIESIRPTDLATLIYTSGTTGTPKGVEIEHHSWTYMGAAWEYKDFIHGDD
VHLLWLPLSHAFGKCLLAICIQIGVTQAVEGRIPRLVRSIAEVKPDVMCGVPRIFEKIRA
GVMTRAPQGRLQSRIAHWAFAVGRDSRPYRLEGRSMPPALAAKYRVADRLVFSTLRRSLG
GVRFMISGGAKLSPQVQEWFYSAGVPIVEGYGATELCAVAFFSEPSTIRFGTVGPVCPGC
EAKLAEDGEVLVKGPIVARGYHNLPEKTAETFVDGWYRTGDIGEFDENECLHITDRKTDL
IKTSGGKYVAPQKVEAALMANCPYLSQAVALGEGHKYIVALVTLDPEKLALWGKRHGHPK
ADYAELARMSEVHESIQRYVDRANAHLERWETVKRFAILDTELDDEEGMVTTSLKVRRNV
VDNRYRDLWESLYDADEAPRG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctgctcgaggacctggaagaccggtcggcgcgcagcttcggggcgctgctggac
cggcaggccgacgagcacccggaccggatcgccttcctcatcccgcagggcgacgacgac
cgggagaacacctgggtgccgatgaccttcgccgagttccgccgccaggcccacgccgtg
gcggcaggcctgctggggctcggtctggggcgcgagcagcgggtggcgatcatgtccggt
acccgcaccgagtggatcatcgccgacatggggatctcctgcgccggaggggcgaccacc
accgtctaccccaacacgaatgccgaggagaccgcattcatcctcaccgactccgactcg
cagatcgtcttcatcgacaccgtcgcgcagctggagaagatccggtcgcgcccagagctg
gacagccacgtccgcgcgatcatcctcttcgacgagtctgagcgcgctgaggcggccggg
gggagcgtcgacgagagggtcatgtcgatggccgacctgatcgccgacggtcgacgtcgg
ctggcggccaggcccgacctggtgcgccgcgtcatcgagtcgatccgtccgacggatctg
gccaccctcatctacacctccggcaccaccggcacccccaagggcgtcgagattgagcac
cactcctggacgtacatgggtgccgcctgggagtacaaggacttcatccacggcgacgac
gtccacctgctgtggctgccgctgtcccacgccttcggcaagtgcctgctggccatctgc
atccagatcggcgtcacccaggccgtagagggccgcatcccgcggctggtccgcagcatc
gcagaggtgaagcccgacgtgatgtgcggggtgccgaggattttcgagaagatccgggcc
ggcgtcatgacccgggccccgcagggccgccttcagagcaggatcgcccactgggccttc
gctgtgggccgcgactcgcgcccctaccgcctcgagggccgatccatgccgcccgccctg
gcggcgaagtaccgggtggccgaccgtctggtcttctcgaccctgcgccggagcctgggc
ggggtgcggttcatgatctccggcggagccaagctgtccccacaggtccaggagtggttc
tactcggcgggggtgccgatcgtggagggttacggcgccaccgagctgtgcgcggtggcc
ttcttctccgagccgagcacgatccgcttcggcaccgtcgggccggtctgccccggctgc
gaggcgaagctcgccgaggacggcgaggtgctggtgaagggccccatcgtggcgcgcggc
taccacaatcttcccgagaagacggccgagacattcgtcgacggctggtaccgcaccggt
gacatcggggagttcgacgagaacgagtgcctgcacatcaccgaccgcaagaccgacctc
atcaagacctccggcggcaagtatgtggccccccagaaggtggaggcggcgctgatggcc
aactgcccctacctgtcccaggcggtggcgctgggcgaggggcacaagtacatcgtcgcg
ctggtgaccctcgaccccgagaagctcgcgctgtgggggaagcgccacgggcacccgaag
gccgactacgccgagctcgcccggatgtccgaggtgcacgagtccatccagcgttacgtg
gaccgcgcgaacgcgcacctggagcgctgggagaccgtcaagagattcgcgatcctcgac
accgagctggacgacgaggaggggatggtcacgaccagcctcaaggtgcgcaggaacgtc
gtcgacaaccgctatcgtgacctgtgggagtccctgtacgacgcggacgaggctcccagg
ggctga
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