Acidipropionibacterium acidipropionici ATCC 4875: PACID_23270
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Entry
PACID_23270 CDS
T02345
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PACID_23270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbo03019
]
PACID_23270
03009 Ribosome biogenesis [BR:
pbo03009
]
PACID_23270
Messenger RNA biogenesis [BR:
pbo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PACID_23270
Ribosome biogenesis [BR:
pbo03009
]
Eukaryotic type
Pre-60S particles
RNases
PACID_23270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF7923
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
AFV90108
UniProt:
K7RYL4
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All DBs
Position
2470380..2470994
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AA seq
204 aa
AA seq
DB search
MLVWIDCEMTGLDLDHDGLIEVAALVTDGGLNVQGEGVDVIIKPEPEWLEHMNDFVRGMH
THSGLLDELDSGLSMEEAQKQVLDYIRTHVPEAGKAPLAGNTIGTDRSFLAKDMPELEGY
THYRNVDVSSIKELARRWYPDAFHHTPAKQGNHRALADIQESIEELMYWREALMVPAPGP
DSKKATEIATKYQGFLTGAGHDQA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgtggatcgactgcgagatgaccgggctcgacctggaccatgacggactgatc
gaggtggcggccctggtgaccgacggcggcctcaacgtccagggcgagggggtcgacgtc
atcatcaagcccgagccggaatggctcgagcacatgaacgacttcgtccgcggcatgcac
acccactccggtctgctcgacgagctcgactccgggctgtccatggaggaggcccagaag
caggtcctggattacatcaggacccacgtgcccgaggccggcaaggccccgctggccggc
aacaccatcggcaccgaccggtccttcctggccaaggacatgcccgagctggagggctac
acccactaccgcaatgtcgatgtctcctccatcaaggagctggcgaggcgctggtacccg
gacgccttccaccacaccccggccaagcagggcaaccaccgggctctggccgacatccag
gagtccatcgaggagctcatgtactggcgcgaggccctcatggtccccgcacccgggccg
gactccaagaaggccaccgagatcgccacgaagtaccagggcttcctcaccggcgccggg
cacgaccaggcctga
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