Acidipropionibacterium acidipropionici ATCC 4875: PACID_23930
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Entry
PACID_23930 CDS
T02345
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbo03032
]
PACID_23930 (hup)
03036 Chromosome and associated proteins [BR:
pbo03036
]
PACID_23930 (hup)
03400 DNA repair and recombination proteins [BR:
pbo03400
]
PACID_23930 (hup)
DNA replication proteins [BR:
pbo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PACID_23930 (hup)
Chromosome and associated proteins [BR:
pbo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PACID_23930 (hup)
DNA repair and recombination proteins [BR:
pbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PACID_23930 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
DUF937
Mnd1
SSPI
ABCA11_C
Motif
Other DBs
NCBI-ProteinID:
AFV90169
UniProt:
K7RQ57
LinkDB
All DBs
Position
2529800..2530075
Genome browser
AA seq
91 aa
AA seq
DB search
MTKSELIKAIAKQASLTEAQTNEAVKALTDVITDALAKGEKIQLPGLLTAETVERPARNG
RNPRTGESMTIPAHKAVKLSASSTLKKAVSD
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgagctcatcaaggcgattgccaagcaggcgtctctcaccgaggcgcag
accaatgaggccgtcaaggccctgaccgacgtgatcaccgacgctctggccaagggcgag
aagattcagcttcccggcctgctcaccgccgagaccgtcgagcgcccggcccgcaacggc
cgcaacccgcgcaccggtgagtccatgaccatccccgcccacaaggcggtgaagctctcg
gcctccagcaccctgaagaaggccgtctctgactga
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