Acidipropionibacterium acidipropionici ATCC 4875: PACID_25600
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Entry
PACID_25600 CDS
T02345
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PACID_25600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbo03400
]
PACID_25600
DNA repair and recombination proteins [BR:
pbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PACID_25600
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PACID_25600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
Anti-TRAP
AAA_21
DnaJ_CXXCXGXG
AAA_29
ATPase
nSTAND1
HypA
AAA_16
AAA_25
DUF4350
Viral_helicase1
RNase_E_G_Thio
cobW
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
AFV90336
UniProt:
K7RVC3
LinkDB
All DBs
Position
complement(2695345..2697831)
Genome browser
AA seq
828 aa
AA seq
DB search
MTQEPQQSRPHGPDRISVRGARVHNLHGIDVDIPLNRMVGIAGVSGSGKSSLALGVLYAE
GSRRYLEALSTYTRRRLTQASRAGVDSVEHVPAALALRQRPGIPGVRSTFGTSTELLNSL
RLVFSRLARHRCPNGHYLEPTTDVALDRPLTCPTCRATFRAPGAESLAFNSAGACPRCSG
TGVVRDVDDATLVPDESLTIEDGAVESWKIMGSTPNPRVVAELGVRTDVPFAELSAEERR
IVFDGPQVKRHIMVPSKNGRIFDLNWTYRNARVAVREALAGAKSEKGLARINRFLSVQTC
PDCGGSRLSQAARAPLVDGQDLASASAMTLQELVDWLPGVVDTVPADMTAMARTIISQMI
DTAGRLLELGLGYLSLDRASATLSTGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPSNV
DGLLGVIDDLLADGNSVVVVDHDVALLRRADHLIEIGPGSGADGGTVVTAGTVAEVIEDP
HSLIGPFLSGRSRVAMDAPGTDPRGVIRMTTGPIHTVGPLEVEIPRGRLTVVTGVSGSGK
TTMVLESLVPGLEALVEGSPLPDPVRSIEADGLRRVHLIDSTPIGINVRSTVATYSGVMD
ELRKAWAATDDARSAGHGAGDFSYNTGELRCPTCSGTGEISLDVQFLPDVDIVCPDCGGT
RFAPEAGRIRRNGVSLPELLGRSVARALDDVGDIPAVRRRLRTLVDLGLGYLTLGESTPA
LSGGEAQRLKLASQMARDQADAVFVFDEPTVGLHPLDVETLLRVLGRLLGHGATVVVIEH
DLDVIGHADHIIDMGPGGGAEGGRIVATGTPAEIAAEPGSLTGRYLAR
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaccgcagcagtcacgaccccacggccccgaccgcatcagtgtcaggggt
gcgcgggtccacaacctgcacgggatcgacgtcgacatcccgctgaaccggatggtcggg
atcgccggggtctcgggatcggggaaatcctccctggccctgggagtgctctacgcggag
ggctccaggcggtacctggaggccctgtcgacctacaccagacgccggctcacccaggcc
tcgcgggccggggtcgactcggtggagcatgtgccggccgccctggccctgcggcagcgc
ccggggatccccggcgtccgcagcaccttcggcacctcgaccgaactgctcaacagcctg
agactggtcttctcccggctggcccgccaccgctgcccgaacggccactacctggaaccg
accaccgacgtcgccctggaccgcccgctgacctgcccgacctgccgggccacgttccgg
gcccccggcgccgagtccctggccttcaactccgccggggcctgcccgcgctgctcgggc
accggggtggtccgcgacgtcgacgacgccaccctggtgcccgacgagtcgctgaccatc
gaggacggcgccgtcgaatcctggaagatcatgggctcgacgccgaatccccgggtcgtc
gccgaactcggggtgcgcaccgacgtccccttcgccgagctgtcggccgaggagaggcgg
atcgtgttcgacgggcctcaggtcaagaggcacatcatggtgccctcgaagaacggcagg
atcttcgacctcaactggacctaccgcaacgcgcgggtcgccgtccgcgaggccctggcc
ggagcgaaatccgagaaggggctggccaggatcaaccgcttcctgtcggtgcagacctgc
cccgactgcggcgggtcccggctctctcaggccgcccgggcgccgctggtcgacgggcag
gacctcgcctcggcgtccgccatgaccctccaggaactcgtcgactggctgcccggagtc
gtcgacaccgtgcctgccgacatgaccgcgatggcgcgcacgatcatctcccagatgatc
gacaccgccggacgactgctcgaactgggcctgggctacctctccctggaccgcgcctcg
gccaccctgtcgaccggggagaggcagcgagtccagctggccagagccgtccgcaaccgc
accaccggcgtcctctacgtcctcgacgaaccctcgatcggcctgcacccctccaatgtc
gacgggctgctcggcgtcatcgacgacctgctcgccgacgggaactcggtggtggtcgtc
gatcacgacgtcgccctgctgcgccgggcggaccacctcatcgagatcggcccgggctcg
ggcgccgacggcggcaccgtggtgaccgccggcaccgtcgccgaggtgatcgaggacccg
cactcactgatcgggcccttcctgtccgggcgctcccgggtggccatggatgcccccggc
accgatccccgcggggtgatccggatgaccaccggcccgatccacactgtggggccgctg
gaggtcgagatcccgcgcggccggctcaccgtggtcaccggggtgtcgggatcgggcaag
acgacgatggtgctcgaatctcttgtgcccggcctggaggcgctggtcgagggctccccg
ctgcccgacccggtgcgcagcatagaggccgacgggctacggcgcgtgcacctcatcgac
tccaccccgatcgggatcaatgtgcgctccaccgtcgccacctactccggagtgatggac
gagctgcgcaaggcctgggccgccaccgacgacgccagaagcgccggccacggggccggg
gacttctcctacaacaccggagagctgcgctgccccacctgctcgggcaccggggagatc
tccctggacgtgcagttcctgcccgacgtcgacatcgtctgccccgactgcggcgggacc
cggttcgcacccgaggccgggcggatccgccgcaacggcgtctccctgcccgaactgctc
ggacgatcggtcgcccgggccctcgacgacgtcggcgacatccccgcggtgcggcgccgg
ttgcgcaccctggtggatctgggcctgggctacctcaccctgggggagtcgacgccggcg
ctgtcgggaggggaggcgcagcgcctcaagctggcctcccagatggcccgcgaccaggcc
gacgccgtcttcgtcttcgacgagcccaccgtcggcctgcaccccctcgacgtggagacc
ctgctgcgggtgctgggcaggctgctgggccatggcgcgacggtcgtcgtcatcgagcac
gacctcgacgtcatcgggcacgccgatcacatcattgacatggggccaggcgggggagcc
gagggcgggcggatcgtggccaccggcacacccgccgagatcgccgccgagcccggctct
ttgaccggccgctacctggcccgatga
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