Paraburkholderia bonniea: QS306_00280
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Entry
QS306_00280 CDS
T09664
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pbon
Paraburkholderia bonniea
Pathway
pbon00300
Lysine biosynthesis
pbon00470
D-Amino acid metabolism
pbon01100
Metabolic pathways
pbon01110
Biosynthesis of secondary metabolites
pbon01120
Microbial metabolism in diverse environments
pbon01230
Biosynthesis of amino acids
Module
pbon_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QS306_00280 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QS306_00280 (dapF)
Enzymes [BR:
pbon01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QS306_00280 (dapF)
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Motif
Pfam:
DAP_epimerase
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
WJF90169
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Position
1:complement(65493..66356)
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AA seq
287 aa
AA seq
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MKLKFTKMHGAGNDFIVLDGYTHPVVLTPEQIRQLAERHRGIGADQLLLVEPPTIEGVDF
RYRIFNADGGEVEHCGNGARCFVKFVHDSGLTTQRQIRVQVQNGLLTLTLQDDGEVLVDM
GRPVFEPERVPFETRGLEARREGDDTLWPLEINGVTRWVSVVSMGNPHAVQLVDDVEAFP
VALEGPLIEQHPRFPRRVNAGFMQIVGRHAVKLRVYERGAGETLACGTGACAAVAAGMRR
GWLDSPVTVQTHGGVLTIAWDAASEHAPLMMAGPAITVFSGEIDLAG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaattcaccaaaatgcatggcgcaggcaacgatttcatcgtgcttgacggt
tatacccatcctgttgttctcaccccagagcaaatccgccagctagccgaacgccatcgc
ggcatcggcgcggatcaactcctgctggttgagcctcccaccatcgaaggtgtcgatttc
cgctatcgcatcttcaatgccgatggcggcgaggtcgagcactgcggcaatggcgcgcgg
tgcttcgtcaaatttgttcacgacagcggactgaccacccagcgccagattcgcgttcag
gtgcaaaacggtcttctcaccctcaccctgcaagacgatggcgaagtcctcgtcgatatg
ggccgtccggtcttcgagccagaacgcgtgccgttcgagacgcgtggccttgaagctcgc
cgcgaaggcgatgacacgctctggccgcttgaaatcaatggcgtgacgcgctgggtttcg
gtggtttcgatgggtaatccccatgcggtgcagctcgttgacgacgtagaggcgttccca
gttgcgcttgaggggccgttgatcgagcagcatccgcgctttccccggcgcgtgaatgcg
ggttttatgcagatcgtcggacggcatgccgtcaagctgcgggtctacgagcgcggcgcg
ggtgaaaccctcgcttgcggcacgggcgcatgcgcggcagtggcggcgggaatgcgccgg
ggctggctggattcgcccgtcacggtgcagacccatggcggcgtgctgacgattgcctgg
gatgcggccagtgagcacgcgcccctcatgatggcgggccccgccatcacagttttttca
ggcgaaatcgacctggccggttag
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