Paraburkholderia bonniea: QS306_02575
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Entry
QS306_02575 CDS
T09664
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbon
Paraburkholderia bonniea
Pathway
pbon00300
Lysine biosynthesis
pbon00470
D-Amino acid metabolism
pbon01100
Metabolic pathways
pbon01110
Biosynthesis of secondary metabolites
pbon01120
Microbial metabolism in diverse environments
pbon01230
Biosynthesis of amino acids
Module
pbon_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QS306_02575 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QS306_02575 (lysA)
Enzymes [BR:
pbon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QS306_02575 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
WJF90577
LinkDB
All DBs
Position
1:complement(589677..590948)
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AA seq
423 aa
AA seq
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MTPSAFAYVDGVLHAERVSAVDLAEQFGTPLYVYSRAALTDAWQAYAGACQGRRASVHVA
VKANSNLAVLNVFARLGAGFDIVSSGELARVLAAGGKAENTVFSGVAKRADEMREALIAG
VKCFNVESIPELDRLNAVAASLGKRAPVSLRVNPDVDAKTHPYISTGLKSNKFGIAFDEA
RTAYRTAAAMPHLNVIGIDCHIGSQITEVAPYLDAIDKLLELVEQIETDGATLSHIDVGG
GLGITYLDETPPEIGHFVRTLLDHIEARGHGQREVYFEPGRSLVGNAGVMLTRVEFLKPG
AEKNFAIVDAAMNDLARPAMYEAFHAIAPVVQHAAGTTPGQIYDVVGPVCESGDWLGRDR
HLAIHPGELLAVHSAGAYGFTMSSNYNTRPRAAEIMVDGDQAHVVRAREEVTQLFAQEAV
LPA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgactccttccgcatttgcctacgtcgacggcgtgctgcacgccgaacgcgtgtcagcc
gtcgatctcgccgaacagttcggcactccgctttacgtgtattcccgcgcggcgctcacc
gatgcctggcaggcatacgctggcgcttgccaaggacgccgcgccagtgtgcatgtcgcc
gtcaaggccaacagcaatctcgcggtgctcaatgtcttcgcccggcttggcgcgggcttc
gacatcgtctcgagtggcgaactggcacgagtgctcgcggctggcggcaaagcagaaaac
accgtgttctccggcgtcgccaaacgggccgacgaaatgcgcgaagcactgatcgcaggc
gtcaaatgctttaacgtcgaatccattcccgaactcgaccggctcaatgccgttgccgcg
tcactcggcaaacgtgcgccggtttcgttgcgcgtcaatcccgacgttgatgccaaaacc
cacccctatatttcgaccggtctcaagtcgaacaaattcggcattgccttcgacgaagca
cgcaccgcctaccgcaccgcagcagccatgccgcacctcaacgtgatcggaatcgactgc
catatcggctcgcaaatcaccgaagtcgcgccgtacctggatgcaatcgacaagctgctc
gaactcgtcgagcagatcgaaaccgatggcgcgacgctcagccacattgatgtcggcggt
ggcctgggcattacttacctggacgaaacaccgccagaaattggccacttcgtgcgcaca
ctgctggaccacatcgaagcacgcggccatggtcagcgcgaagtgtatttcgaaccggga
cgctcgctggttggcaacgcgggggtgatgctcacacgagtcgaatttctgaagcctggc
gcagaaaaaaacttcgccatcgtggacgccgcgatgaacgaccttgcccgccccgcgatg
tacgaagcctttcacgcaattgcgccggtagtgcagcatgcggcaggcaccacgcctggc
cagatctatgacgtggtgggtccagtctgcgaaagcggcgactggctaggccgcgaccgg
cacctggcgatccatcccggcgaattgctcgccgtgcattcagcgggtgcctatggcttt
acgatgagctccaactacaacacccggccacgcgccgccgaaataatggtggacggtgac
caggctcatgttgtccgggcacgtgaagaagtcacgcagttgtttgctcaggaagcggtt
ttgcccgcttaa
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