Paraburkholderia bonniea: QS306_04035
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Entry
QS306_04035 CDS
T09664
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pbon
Paraburkholderia bonniea
Pathway
pbon00260
Glycine, serine and threonine metabolism
pbon00460
Cyanoamino acid metabolism
pbon00630
Glyoxylate and dicarboxylate metabolism
pbon00670
One carbon pool by folate
pbon00680
Methane metabolism
pbon01100
Metabolic pathways
pbon01110
Biosynthesis of secondary metabolites
pbon01120
Microbial metabolism in diverse environments
pbon01200
Carbon metabolism
pbon01230
Biosynthesis of amino acids
pbon01240
Biosynthesis of cofactors
pbon04981
Folate transport and metabolism
Module
pbon_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QS306_04035 (glyA)
09102 Energy metabolism
00680 Methane metabolism
QS306_04035 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QS306_04035 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
QS306_04035 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QS306_04035 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
QS306_04035 (glyA)
Enzymes [BR:
pbon01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
QS306_04035 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Met_gamma_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
WJF90842
LinkDB
All DBs
Position
1:916160..917407
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AA seq
415 aa
AA seq
DB search
MFDRAQSTIANIDPDLWQAIQQENRRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDIVEQLALDRVKQIFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEAEDIDYAAAEKLAQEHKPKMIVAGASAFAL
HIDFERLAKIARSVGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKSEFEKVINSAIFPGIQGGPLMHVIAAKAVAFKEALAPEFKVYQQQVLENARVLAETL
VQRGLRIVSGRTESHVMLVDLRAKQITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGVEEAVQVGHLIADVLDHPEDAGVIERVRGQVSELTRRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccagagcactatcgccaatatcgaccctgacctgtggcaggcgatc
cagcaggaaaaccgccgccaggaagatcacattgagctgatcgcgtcggaaaactacacg
agcccggctgtcatggccgcgcagggctcgcaactgaccaacaagtacgccgaaggttat
ccaggcaagcgctattacggtggctgcgagtacgtcgacatcgttgagcaactggcgctt
gatcgcgtcaagcagatcttcggcgctgaggcggccaacgtgcagcctaattctggttcg
caggccaaccagggcgtgttctttgcaatgctcaagccaggcgacaccatcatggggatg
agtctcgcgcatggcggtcacctgacgcacggctcgcccgtcaacatgtcgggaaagtgg
ttcaacgtggtgagctacggcctgaatgaagccgaagatatcgactacgcagcggcagaa
aaactcgcgcaggagcacaagccgaagatgatcgtggcgggcgcttccgcgttcgcgctg
cacattgattttgagcgtctggcaaaaatcgcccgctcggtgggcgcgtatttcatggtc
gacatggcgcattacgctgggcttatcgccgcaggggtttatccgaacccagtgccgcat
gccgacttcgtgaccaccaccacgcacaagagcctgcgtggcccgcgcggtggtgtgatc
ctgatgaagtccgaattcgaaaaagtgattaattcggcgatcttccctggcatccagggt
ggcccgctgatgcatgtgatcgcagctaaggccgtggctttcaaggaagcgcttgcgcca
gagttcaaggtgtatcagcaacaggtgctcgagaatgcacgggttctggctgaaaccctg
gtgcagcgtggcttgcgcattgtgtcgggccgcactgagagccatgtgatgctggtcgac
ctgcgcgccaagcagatcaccggcaaggcggcagaagccgcgctgggcgcggcgcacatc
acggtgaacaagaacgcgattcctaacgatcctgaaaagccatttgtgacgagcggtgtg
cgtctcggttcgcccgcgatgaccacgcgcggttttggcgtggaggaagctgttcaggtt
gggcatctgattgcggatgtgctggaccatcctgaagacgctggcgtgatcgaacgtgtg
cgtggtcaggtgagcgagctgacacgccgctttccggtttatcgctag
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