Paraburkholderia bonniea: QS306_04870
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Entry
QS306_04870 CDS
T09664
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pbon
Paraburkholderia bonniea
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbon03032
]
QS306_04870 (gyrA)
03400 DNA repair and recombination proteins [BR:
pbon03400
]
QS306_04870 (gyrA)
Enzymes [BR:
pbon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
QS306_04870 (gyrA)
DNA replication proteins [BR:
pbon03032
]
Prokaryotic type
DNA Topoisomerases
QS306_04870 (gyrA)
DNA repair and recombination proteins [BR:
pbon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QS306_04870 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WJF90993
LinkDB
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Position
1:1116732..1119368
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AA seq
878 aa
AA seq
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MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQSFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRMAKIGHELISDIDKETVDFEPNYDGSETQPSILPARIPNLLINGSSGIAVGMAT
NIPPHNLNEVVDACHHLLQHPEATIDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRV
VMRATTHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLACFLSHRRE
VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPSPPIAKQELMARSWDSSLV
RDMLARAESDNATVGGREAYRPDGLLPAFGMQANGMYHLSDVQTQEILQMRLQRLTGLEQ
DKILGEYRDVMAQIADLLDILARPERITAIIVGELTSIKSEFGDARRSRIELNATELNTE
DLITPQDMVVTMSHTGYVKSQPLSEYRAQKRGGRGKQATSMKEDDWIDTLFIANTHDHIL
CFSNRGRVYWIKVYEVPQGSRNSRGRPVVNMFPLQDGEKINVVLPVKEFSADQYVFMATA
LGTVKKTPLEAFSRPLRKGIIAVGLDDGDYLIGAAITDGQHDVMLFSDSGKAVRFDENDV
RPMGREARGVRGMQLDDGQQVIALLVAGDEQQSVLTATENGFGKRTPITEYTRHGRGTKG
MIAIQTSERNGRVVAATLVDPEAQIMLITNTGVLIRTRVSEIREMGRATQGVTLISLDEG
TKLSGLQQVAEAEVDVDLDSDAEGPAEEGGAGEDGSAV
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgccaaagagactctgccaatctccctcgaggaggaaatgcgccgttcg
tatctcgattacgcgatgagcgtgatcgtggggcgtgcgctgcctgatgtccgcgatgga
ctgaaaccagtgcatcgacgcgtcctgtacgcgatgcacgaactcaacaacgactggaac
cgcgcttacaagaagtccgcgcgtattgtcggcgatgtcatcggtaaatatcacccgcac
ggcgataccgctgtttacgacacgattgtccgtatggcgcagagtttttcgttgcgttac
atgctggtcgacgggcagggcaatttcggctcggtagatggcgataacgccgctgcgatg
cgttataccgaaattcgtatggctaaaattggccatgaactgatttccgacatcgacaag
gaaaccgtcgatttcgagcctaactatgatggcagtgaaacccagccgtctatcttgcct
gcccgtattcccaatctgttaatcaatggctcgtcagggattgcggttggcatggccacc
aatatcccgccgcacaacctgaatgaagtggttgatgcttgccatcacctgcttcagcac
ccggaagcaacaatcgacgaactgatcgagattgttcctgcccctgatttcccgacggcc
ggcattatttacggtgtagccggtgtgcgcgatggttatcgcacgggccgtggccgtgtg
gtgatgcgcgcaaccacgcacttcgaagaaatcgaccgtggccagcggatggccatcatc
gtcgatgagttgccgtatcaggtgaacaagcgctcacttcttgagcgtatcgctgaactc
gtcaacgagaaaaagcttgagggcatttctgatatccgtgacgagtccgacaagagcggt
atgcgtgtcgtgattgaactcaagcgcggggaagtgcctgaggtggtgctgaacaatctg
tacaaggccacccaactgcaagatacgtttggcatgaatatggtggcgctggtcgatggc
cagcccaagctgctgaacttgaaagaaatgctggcgtgtttcctgtcgcaccggcgggaa
gtgctgacgcggcgcactgtatacgaactgcgcaaggcgcgggaacgtggtcacgtgctc
gaagggctggcggttgcgctggctaatattgatgagttcattgcgatcatcaaggccgcg
ccgagccctccgatagcgaagcaggaattgatggcgcgctcgtgggattcgtcattggtg
cgtgacatgctcgcccgtgctgagtcggacaatgccacggttggcggccgtgaagcgtac
cggccagatggtttgctgccggcgtttggcatgcaggcgaacgggatgtatcacctgtcg
gatgtccagacgcaggaaatcctgcagatgcgcttgcagcgcctgactgggctggagcag
gacaaaattcttggcgagtaccgtgacgtaatggcccagattgccgatttgctcgatatt
ctggcgcgccctgagcgcatcacggcgatcattgttggcgagctgacgtcgattaagagc
gaattcggtgatgcgcgccgttcaagaattgaactcaatgccactgagctcaataccgaa
gatctgattacgccgcaggacatggtggtcactatgtcccataccggttacgtcaagtcg
cagccgttgtcggaataccgggcgcaaaagcgcggcgggcgcggcaagcaggcgacttca
atgaaagaagacgactggatcgatacgcttttcattgcgaatacgcacgatcacatcctt
tgcttctcaaatcgtggccgggtctactggatcaaggtgtacgaggtgccgcaaggttcg
cggaactcacgcggccgtccggtcgtgaacatgttcccgctgcaggatggcgaaaaaatc
aacgttgttctgccagtgaaagagttttctgccgatcaatatgtcttcatggcaactgcg
ctagggacggtcaaaaaaactccgcttgaggcctttagccgaccgctgcgcaagggtatt
atcgcggtcggccttgatgacggtgactacctgattggggctgcgattacagacggccag
cacgatgtgatgctgttttctgattcgggcaaggcggttcgcttcgacgaaaatgatgtc
cgtccgatggggcgtgaggcgcgcggtgtgcgtggcatgcaacttgacgatggtcagcag
gttatcgcgctgctggtggctggcgatgagcagcagtcggtgcttaccgctaccgagaac
ggttttggcaagcgcacgccgattactgaatacactcgtcacggccgcggcaccaagggc
atgattgcgattcagacctccgaacgcaatggccgggtggttgctgcgacgctggtcgat
ccggaagcccagatcatgctgattaccaataccggcgtgctgatccgcacgcgggtatcg
gaaattcgggaaatggggcgcgcaacccaaggtgttacactcatcagccttgatgagggc
acgaagctttcgggcctgcagcaggtggccgaagccgaggttgatgtcgatctggatagc
gacgccgaaggtcccgccgaagaaggtggtgcaggtgaggacggcagcgcggtttga
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