Paraburkholderia bonniea: QS306_06440
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Entry
QS306_06440 CDS
T09664
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbon
Paraburkholderia bonniea
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbon03016
]
QS306_06440 (truB)
Enzymes [BR:
pbon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QS306_06440 (truB)
Transfer RNA biogenesis [BR:
pbon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QS306_06440 (truB)
Prokaryotic type
QS306_06440 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
UPF0113
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WJF91266
LinkDB
All DBs
Position
1:1473181..1474116
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AA seq
311 aa
AA seq
DB search
MNSSQRPRVPRRVLDGVLLLDKPLGLSSNDALIRAKRIYQAKKAGHTGTLDPLATGLLPL
CFGEATKFSQDLLEADKTYEATMRLGIRTTTGDAEGEPSEIRPVTCDLPAIEQALAGFLG
DIVQVPPMYSALKRDGKPLYEYARAGQVVEREGRQVTIHALDLLSCSLPDVSFRVVCSKG
TYVRTLAEDLGEVLGCGAHLVGLRRTAVGVLTLEHAVTLDALSAVTEAERDAWLQPVDAL
LSTFPAVRLDDEAARRFLHGQRLKVSEVALADDAVNASRVRIYNAEGRLLGVARVGDGVV
APERLVVTAGM
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttcccagcgtcctcgcgtgccgcgtcgcgtgcttgatggtgtactgctgctc
gacaagccgcttggtctgtcgagtaacgacgcgctgattcgggccaaacgtatttatcag
gccaaaaaagctggccataccggcacgcttgatccgctggccacgggtttgctgccattg
tgttttggtgaagcgaccaagttttcgcaggatttgctcgaagcggacaaaacctatgag
gcgacgatgcgcctcggcattcgcaccacaacaggggatgccgaaggcgagccaagcgaa
atccgtcccgttacctgcgacctgccagccattgaacaagcactagccggttttctgggt
gacatcgtgcaggtgccaccgatgtattcggcgctcaaacgcgatggcaagcctttatac
gagtacgcccgggcggggcaggtcgttgagcgcgaagggcgtcaggtgacaatccatgca
ctcgatttgttgagctgttcattgccggatgtgagctttcgcgtggtgtgcagcaaaggg
acttatgtgcggactctggctgaggatcttggcgaggtgctcgggtgcggtgctcacctg
gtgggattacgccgcacggctgttggggttttgacgctcgaacacgcagtgacgctggat
gcgctgtcggccgtgaccgaggccgagcgcgatgcctggttgcagccggtggatgcgttg
ctttcgacatttcccgctgtgcggctggatgacgaggctgcacgccggtttttgcatggg
cagcgcttgaaggtatctgaggttgcgctggccgatgacgcggtgaacgcatcacgggtt
cgcatttataacgctgaaggacgtttgctgggcgtggccagggtgggcgatggcgttgtt
gcaccagaacggctggtggtgactgcggggatgtga
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