Paraburkholderia bonniea: QS306_06890
Help
Entry
QS306_06890 CDS
T09664
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbon
Paraburkholderia bonniea
Pathway
pbon03420
Nucleotide excision repair
pbon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QS306_06890
03430 Mismatch repair
QS306_06890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbon03400
]
QS306_06890
Enzymes [BR:
pbon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QS306_06890
DNA repair and recombination proteins [BR:
pbon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QS306_06890
MMR (mismatch excision repair)
Other MMR factors
QS306_06890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_22
AAA_11
RecC_4th
DUF8203
Motif
Other DBs
NCBI-ProteinID:
WJF88885
LinkDB
All DBs
Position
1:1574257..1576620
Genome browser
AA seq
787 aa
AA seq
DB search
MSDLLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQRLASPSTVLAVTF
TNKAAREMLARLSALLPLDPRGMWIGTFHGLCNRMLRAHHRDAGLPSTFQILDTADQLSA
LKRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDTFNRKFVELYEAYDQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFTHILVDEFQDTNKLQYAWLKLLAGQNSPV
FAVGDDDQSIYAFRGANVGNMRDFEQEFNVRHLIKLEQNYRSHGHILDTANHLIAHNARR
LGKNLRTDAGHGEPVRVYEAASDSQEAGWLAEEIKALIHTGCSRSEIAVLYRSNAQSRTL
EHALVNAGIAYRVYGGLRFFERQEIKHALAYLRLIDNPNDDTAFMRVVNFPTRGIGARSL
EQLADAARLHNCALAAAIPYVMGKAGTSLGGFAGLIEQMRAQTQQMSLPDTVEHVVRASG
LEAFYQNEREGQDRLDNLQELVNAAVAFVSEEGYGRETPARSIPLRPGASAAPELTQLSA
APDAEVFDAVSPADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FMAVFITGLEEGLFPHENSALEADGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPPETLKWLTAKVEAGARWGGRSDNAGYGRDWFARPGQRQEAYAGSAEVNA
PLPAFANAQRAAEIGFRVGQAVFHTKFGEGTVTALEGGGTDAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctgctcgccaatctgaatcccgaacaacatgctgccgtcaccttgcctaat
gagccggccctgattctggctggcgcgggtagcggtaaaacccgtgtcctgattacccgc
atcgcctggctgatccagcagcggctggcttcgcccagcacggtgctggcggttaccttc
acgaataaagcggcgcgtgaaatgctcgcgcgcctttcggcgttgctgccgctcgatccg
cgcgggatgtggatcggcacttttcatggcctgtgcaaccgcatgctgcgggcgcaccac
cgcgatgccggactgccatcgaccttccagattctcgataccgccgaccagctttcggcg
ctcaagcgcttgatgaaaggcttgaatatcgacgacgagaaatacccggcgaaaaatctc
cagtacttcattaacaacgccaaggagcaggggctgcggcccaaggatgtcgatgccacc
gacaccttcaaccgcaagttcgttgagctatacgaagcctacgaccagcaatgccagcgc
gaaggcgtggtggattttccggagctgctgctgcgttgctacgaactgctggcgcacaac
ccgccgctgcgcgcgcattatcaggcgcgcttcactcacatcctggttgatgagttccag
gacaccaacaagctgcaatacgcgtggctcaagctgctggcggggcaaaacagcccggtg
ttcgcggtgggcgacgacgaccagtcgatctatgcgttccgtggcgcgaacgtcggcaac
atgcgcgacttcgaacaggagttcaacgtccggcatttgatcaaactggagcagaactac
cgctcgcacggccatatcctcgataccgcgaatcacctgattgcgcacaacgcacggcgg
cttggcaaaaatctgcggactgacgcgggtcatggcgagccggtgcgggtctatgaggcc
gcgtcagattctcaggaggcgggctggctcgccgaagaaatcaaggcgctgattcacacc
ggctgttcgcgcagcgaaatcgcggtgctgtatcgcagcaatgcgcagtcacgcacgtta
gaacatgcgctggtgaacgcgggcattgcttatcgcgtgtatggcgggctgcgctttttc
gagcgccaggaaatcaagcatgcgctggcgtatctgcggctgattgataacccgaacgat
gacactgcgtttatgcgcgtggtgaatttcccgacacgcgggatcggggcgcgctcgctg
gagcaactggcagatgccgcgcgcttgcataactgcgcgctggcagcggcgattccgtat
gtgatgggcaaggcgggcacgagcctcggtggttttgccgggttgatcgagcagatgcgg
gcgcagacccagcagatgagcttgccggacacggttgaacacgtggtgcgtgccagcggc
ctggaagccttttatcaaaacgagcgtgaaggccaggaccggctggataacttgcaggag
ctggtgaacgccgccgtggcatttgtcagcgaagaaggctatggccgtgagacgcccgcg
cgttcgattccgttgcgcccgggtgccagcgctgcgcccgaactgacgcagctcagcgcg
gcacctgacgccgaggtgttcgacgcggtgagcccggccgatcctgcgcaaaacccggac
acgatgacaccgctggcgggctttttatcgcacgcctcgctggaggcgggcgacaaccag
gcccaggcgggccaggatgcggtgcaattgatgacggtgcacgccgccaaagggctcgaa
ttcatggcggtgtttatcaccgggcttgaagaggggctctttccgcacgaaaacagcgcg
ctcgaagccgatggtctggaggaagagcgccgtctgatgtacgtggcgatcacccgcgcc
aaagagcggctgtatctatcgtttgcgcaaagccggatgttgcatggccagacccgctac
aacatccgttcgcgctttttcgacgaattgccgcctgaaactctgaaatggctgaccgcg
aaagtcgaagccggggcccgctggggtggccgctccgataacgcgggttatggccgcgac
tggttcgcgcgtcccggccagcgccaggaagcttacgctggcagcgctgaagtgaatgcg
ccgctgccagcttttgccaatgcgcagcgggcagcggaaattggttttcgtgtgggccag
gcggtgtttcatacgaagttcggcgaaggtacggtcaccgcgcttgagggcggtggcacc
gatgcaaaggcgcaggtcaagttcaagcggcatggcgagaaatggctcgcgctggccgtg
gccaaacttcaggcggtcgaatga
DBGET
integrated database retrieval system
