Paraburkholderia bonniea: QS306_08380
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Entry
QS306_08380 CDS
T09664
Symbol
ycaO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pbon
Paraburkholderia bonniea
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbon03009
]
QS306_08380 (ycaO)
Ribosome biogenesis [BR:
pbon03009
]
Prokaryotic type
ribosomal protein modification factors
QS306_08380 (ycaO)
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
WJF89157
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Position
1:complement(1921828..1923570)
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AA seq
580 aa
AA seq
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MQTEGFKSESFISGKDASLEFSIATMQQKLAARGFFLEESSWLNPAENIWSCHMRDKACP
MLFTNGKGASELAARASAIGEFIERLGCHYFWTHFYLGATRANRPFVHYPQERWFAPTED
GAWPAELLNPELHAFYNPDSDIDGSVVVDLNSGNVERGICALPYTRLRDGATTWFPVNII
GNLYVSNGMSAGNTKLEARTQALSEIFERQVKYRIISEGLCLPDVPEAVIARYPSIAAGV
KSLRDAGFGILIKDASLGGRYPVMNVTLLHPKDQGVFPSFGAHPRFEIALERALTELLQG
RSLESLEDFPEPGFDMEEIAAVSNLEIHFVDSSGVVSWNFLSDKPDYEFADWNFSATTQE
DYDWLCACLADEEKDVYVADFEELGAYACRILVPGMSEIYPVEDLQWENNSVGNDIRPAL
VRLNELDDDECRALLDELQTMNLGDERPLWEILGLAVPLGTAWKELRIGELKTLLALALG
DAETAREGCDWIHHYRQMNRGRWLVYRCVEALLKLDTPANFTHSLTLLYGAETLRQAQAL
VARKERFFGLVSLGADFEGSAMHSNLLAAYDKLFAATAAT
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgaaggcttcaaaagcgaaagcttcatttccggcaaggacgcatctctggaa
ttttccattgccaccatgcagcagaagctggcggcgcgtggctttttcctcgaagaaagc
tcgtggctcaatccggccgaaaacatctggtcgtgccatatgcgcgacaaggcgtgtccc
atgttgttcaccaacggcaagggtgcctcggaactggcggcccgtgccagcgcaattggc
gaattcatcgagcgcctgggctgccattatttctggacgcatttttatcttggcgcaacc
cgggccaaccgtcccttcgttcactacccgcaggagcgctggtttgctcccaccgaagac
ggcgcatggccagcggaattgctgaaccctgagttgcacgcgttctataacccggacagc
gatatcgacggctcggtggtggtcgatctgaactccggtaacgtggagcgcggcatttgc
gcgctgccttatacccgtctgcgagacggtgcgacgacatggttcccggtgaacatcatt
ggcaacctgtatgtcagtaacggcatgtcggcgggcaataccaaactggaagcacgcact
caggcgttgtccgagatcttcgagcgccaggtcaaataccgcatcatcagcgagggcctg
tgtcttcccgatgtgccggaagcagtgattgcgcgttacccgagcattgccgctggtgtg
aagtcgttgcgcgacgcgggcttcggcatcctgatcaaagacgcgtcgctgggtggccgc
tacccggtgatgaacgtgaccttgctgcatccaaaggatcagggggtgttcccgagcttc
ggcgcgcatccgcgtttcgaaatcgcactggagcgcgcgctgaccgaattgctgcaaggc
cgctcgctcgaatcactggaagactttccggagcccggtttcgacatggaagagattgcc
gctgtgtcgaatctggagattcactttgtcgattcgagcggcgtggtgagctggaatttc
ctgagcgacaaaccggactatgaattcgccgactggaatttcagtgcgacgacacaggaa
gattacgactggttgtgtgcctgcctcgctgacgaagagaaagacgtatacgttgccgat
tttgaagaactcggcgcctatgcttgccggattctcgtaccaggcatgtcggagatttat
ccggtggaagacctgcaatgggagaacaacagcgtgggtaacgacatccgtcctgcgctg
gtgcgtttgaacgagcttgacgatgacgagtgccgcgcgctgcttgatgagctgcagacg
atgaatcttggcgatgagcggccgctctgggaaattctcggtcttgccgtaccgctgggg
acggcctggaaagaactgcgcatcggtgagctcaagaccttgctggcgctggcgcttggt
gatgcggagaccgcgcgcgaaggctgtgactggattcaccattaccgccagatgaaccgg
ggacgctggctggtttaccggtgtgtcgaagcgctgctcaagctcgatacgccggccaat
ttcacgcattcgctgacgttgctgtatggcgcggaaacactgcgtcaggcgcaagcgcta
gtggcgcgcaaggagcgattctttggtctggtctcgctcggtgcggatttcgagggcagc
gcgatgcacagtaatttgcttgcggcttacgacaagttgtttgctgcgacggctgcgacc
tga
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