Paraburkholderia bonniea: QS306_10800
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Entry
QS306_10800 CDS
T09664
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pbon
Paraburkholderia bonniea
Pathway
pbon00521
Streptomycin biosynthesis
pbon00523
Polyketide sugar unit biosynthesis
pbon00525
Acarbose and validamycin biosynthesis
pbon00541
Biosynthesis of various nucleotide sugars
pbon01100
Metabolic pathways
pbon01110
Biosynthesis of secondary metabolites
pbon01250
Biosynthesis of nucleotide sugars
Module
pbon_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QS306_10800 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QS306_10800 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
QS306_10800 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QS306_10800 (rfbB)
00525 Acarbose and validamycin biosynthesis
QS306_10800 (rfbB)
Enzymes [BR:
pbon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
QS306_10800 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
WJF89592
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All DBs
Position
1:complement(2472461..2473522)
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AA seq
353 aa
AA seq
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MILVTGGAGFIGANFVLDWLNASDEPVLNADKLTYAGNLRTLKSLQDDPRHIFVRADICD
RDTLDRLFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARSYWNTLGEA
DKAAFRFLHVSTDEVFGSLNATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPT
LTTNCSNNYGPYQFPEKLIPLMLANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLAR
GKPGETYNIGGWNEKKNLDVVHTLCDLLDQRRPKSAGSYRDQITYVTDRPGHDRRYAIDA
RKLERELGWKPAETFETGMAKTVQWYLDNQAWADEVASGDYRKWVETNYAQRA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgattctggtaacgggcggcgctggttttatcggtgccaatttcgtacttgactggttg
aatgcctccgacgaaccggttttgaacgccgacaagctgacctacgcgggcaacttgcga
accttgaagtcgctgcaagacgatccccggcatatttttgtgcgcgcagatatttgcgac
cgtgacacgcttgatcgtctgtttgctgagcacaagccgcgcgcggtgctgcattttgct
gccgaaagccatgtcgaccgctcgattcatggcccggcagatttcgtgcaaaccaatgtg
gtcggcacgttcacgctgcttgaggcagcccgtagttactggaacacgctgggtgaagct
gacaaggcggcgttccgcttcttgcacgtatcgaccgatgaagtgttcggctcgctcaac
gccaccgacccgcagttctcggaaaccacgccatacgcgcctaacagcccttattcggcg
accaaggcgggctccgaccatctcgtgcgcgcctatcaccacacctatggcttgccgaca
ctgacgaccaactgctcgaataactacggtccgtaccagttccccgaaaagctgattccc
ctgatgcttgccaatgcgctcgcaggcaagccgctcccggtttatggcgatggccagaac
gtgcgcgactggctgtatgtcggggaccactgcagtgcgatccgcgaagtgctcgcgcgc
ggcaagccgggcgaaacctacaacatcggcggctggaacgagaagaaaaatctcgacgtg
gtgcatacgctgtgcgatctgctcgaccagcgccggccgaagtcagccggttcttaccgc
gatcagattacctatgtcacggatcgcccgggccatgaccggcgctacgcgatagacgca
cgcaagctggagcgcgaactgggctggaagcccgccgaaacctttgaaaccggcatggca
aaaacggttcagtggtacctcgacaaccaggcgtgggctgacgaagtggcgtcgggcgat
taccgcaaatgggttgagactaactacgcgcaacgcgcataa
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