Paraburkholderia bonniea: QS306_12460
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Entry
QS306_12460 CDS
T09664
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pbon
Paraburkholderia bonniea
Pathway
pbon02024
Quorum sensing
pbon03060
Protein export
pbon03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
QS306_12460 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
QS306_12460 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QS306_12460 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbon02044
]
QS306_12460 (ffh)
Enzymes [BR:
pbon01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
QS306_12460 (ffh)
Secretion system [BR:
pbon02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
QS306_12460 (ffh)
Eukaryotic Sec-SRP protein
QS306_12460 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
AAA_16
AAA_31
Helicase_RecD
YqeC
AAA_30
AAA_14
T2SSE
AAA_33
GTP_EFTU
APS_kinase
cobW
Mg_chelatase
AAA_18
ResIII
NACHT
Rad17
ATP_bind_1
Thymidylate_kin
TsaE
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WJF89905
LinkDB
All DBs
Position
1:2858550..2859917
Genome browser
AA seq
455 aa
AA seq
DB search
MLDNLTQRMARVVKTLRGEARLTEANTQDMLREVRLALLEADVALPVVREFVARVKEKAL
GEEVLSSLSPGQALVGVVQRELTAVIGGDYEGQAVELNLAVTPPAIILMAGLQGAGKTTT
VGKLAKLLREKHKKKVLTVSCDVYRPAAIAQLKSVTEQVGADFFPSEPEQKPVDIARAAV
DWAKRHYHDVVLVDTAGRLGIDEAMMQEITALHQALNPVETLFVVDAMLGQDAVNTAKAF
NDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFVGVAEKLDGLEVFHPDRMANRILG
MGDILALVEEAQRGVDVQAAQKLADKVKKGGDFDLNDFRAQLSQMKNMGGLSTLMDKLPA
QFQQAASGADMGQAEKQMRRMEGIICSMTPAERAKPELIKATRKRRIAAGAGVQVQEVNR
MLNQYDQMRTMMKKLKGGNMQKMMRGMKGMLPGMR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaatctgacccaacggatggcgcgcgtcgtcaagacgctgcgcggcgaagcc
cggcttaccgaggccaacacacaagacatgctgcgcgaagtacggctcgccctccttgag
gcagacgttgcgttgcccgtggtgcgcgaatttgtcgccagagtaaaagaaaaagcgctc
ggcgaagaagtactcagcagcctgtcacccggccaggctctggttggcgtggtacagcgc
gaactgaccgcagtgatcggtggcgattatgaaggtcaagccgtcgaactcaatctcgcc
gtcacgccacccgcgatcatcctgatggccgggctgcaaggcgcaggcaaaacaacgacc
gtcggcaagctggccaagctgctgcgcgaaaagcacaaaaagaaagtgctcacggtgtcg
tgcgacgtctaccgcccagccgccattgcacagctgaaatccgtcaccgaacaggtgggt
gccgatttcttcccttcagagcccgaacaaaaacccgttgatattgcacgcgccgccgtc
gactgggccaaacgtcattaccacgatgtagtgctagtcgatacggcaggccgcctcggg
attgacgaggccatgatgcaagaaatcaccgccctgcatcaggcgctcaatcctgtcgaa
accctgttcgtcgtcgacgccatgctgggccaggacgccgttaataccgccaaggccttc
aacgatgcactgccgctaacaggcgtggtgctcaccaaactcgatggtgattcacgaggc
ggtgccgctctgtcagtacgccacatcaccggcaagccaatcaagttcgtcggggtagca
gaaaaactcgatggccttgaggtgttccatcctgaccggatggcgaaccggattctcggg
atgggcgacatcctcgcgctggttgaagaagcgcagcgcggcgtggatgttcaagcggcg
caaaaactcgccgacaaggtaaaaaaaggcggcgactttgatctcaatgatttccgcgcg
caactgtcacaaatgaaaaacatgggtggcctttccaccttgatggacaagctccctgcc
caatttcagcaagccgcctcgggggctgatatgggccaggcggaaaaacagatgcgccgc
atggaaggcatcatctgctccatgaccccggcagagcgcgccaaacccgaacttatcaag
gccacgcgcaaacgccgtatcgctgcaggcgcgggcgtgcaggtgcaggaagtgaatcgg
atgctgaaccagtacgaccagatgcgcacaatgatgaaaaagctcaagggcggcaacatg
cagaagatgatgcgaggcatgaagggcatgctgcccggcatgcgttaa
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