Paraburkholderia bonniea: QS306_12475
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Entry
QS306_12475 CDS
T09664
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pbon
Paraburkholderia bonniea
Pathway
pbon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QS306_12475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbon03019
]
QS306_12475
Messenger RNA biogenesis [BR:
pbon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QS306_12475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
WJF89908
LinkDB
All DBs
Position
1:2862727..2863389
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AA seq
220 aa
AA seq
DB search
MLDREGFRPNVGIILLNAHNEVFWGKRLREHSWQFPQGGIKYGETPVQAMYRELHEETGL
RPEHIKVIGRTRDWLRYEVPDKFIKREVRGHYRGQKQIWFLLRMLGRDCDICLRATDHPE
FDAWRWNEYWVPLDCVIEFKRDVYQLALTELSRFLRRASSRAEKPGKQPHIVHFSGGDTS
VTTTEVSVATSTETSLQTTMIESDLSQTEATLIRLPGLHD
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgctggatcgtgaaggctttcgcccgaacgtcggcatcatcctcttgaacgcacacaat
gaggtgttttggggcaaacggctccgtgaacattcctggcagtttccgcaaggggggatc
aagtatggcgagactcccgtccaagcgatgtatcgggaattacacgaagaaaccggactg
cgtcctgaacacatcaaggtgatcggccgcacacgcgactggctgcgttatgaggtgccg
gacaagttcatcaagcgcgaagtacgtggccactaccgtggccaaaaacaaatctggttc
ctgcttcggatgttagggcgcgattgcgatatctgcctacgcgcaacagaccaccctgaa
ttcgatgcgtggcgctggaatgagtactgggttccgctagattgcgtgattgaattcaag
cgggacgtctatcaactggcactaacggaactatcccgtttcttgcgccgcgcttcgtca
cgcgcggagaaacctggcaaacagcctcatatcgtgcatttttccgggggcgacacatcg
gtcacgacaacagaggtatctgtcgctaccagcaccgaaacctcgctccaaaccacgatg
atcgaatcagatctcagccagacggaagccacgctgatacgcttgccgggtttgcatgat
tag
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