Paraburkholderia bonniea: QS306_13135
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Entry
QS306_13135 CDS
T09664
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pbon
Paraburkholderia bonniea
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbon03009
]
QS306_13135 (dbpA)
Enzymes [BR:
pbon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QS306_13135 (dbpA)
Ribosome biogenesis [BR:
pbon03009
]
Prokaryotic type
rRNA helicases
QS306_13135 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Cas3-like_C_2
P-loop_SecA
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
WJF90028
LinkDB
All DBs
Position
1:3002748..3004166
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AA seq
472 aa
AA seq
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MTQPNPVPATPAADSAFSQLALPPATLANLTQLGYHEMTPIQAASLPLALAGHDLIAQAK
TGSGKTAAFALALLARLDPRSFAVQAMVLCPTRELADQVTQEIRRLARAEENIKVLTLCG
GTPMRPQTTSLEHGAHIIVGTPGRIMDHLERGGLALQGLKTLVLDEADRMLDMGFFDDIV
TVIRQCPKERQTLLFSATYPDGIAKLSQQFLRNPKEITLTERHDNSKIRQRFYEVVEDER
LHAVGMLLNHYRPVSTLAFCNTKQQCRDLLDVLRAQGFHALALHGELDQRERDQVLIQFA
NRSCSVLVATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQDGWALSLASMN
EMGRVGGLEQAQRREVEWHPLAELSAASNEPLLPPMETLQILGGRKEKIRPGDVLGALTK
DAGFSSAQIGKINVTEFSTYVAIERGVARDALRKLNAGKVKGKKVKVRLMDE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcccaatcccgtccctgccaccccggcagcggactccgcttttagccagctt
gcgctgccgcccgccacgctggccaacctgacgcaactcggctaccacgagatgacgccg
atccaggccgccagcctgccgctcgcactggcaggccacgatctgatcgcccaggccaaa
accggcagcggcaaaaccgcggcattcgcgctcgcgctgctagcgcggctcgatccgcgc
agcttcgccgtacaagcgatggtgctgtgccccacgcgtgaactagccgatcaagttacg
caggaaattcgccgcctcgcacgcgccgaagaaaacatcaaagtgctcacgctctgcggc
ggcacaccaatgcggccgcaaaccaccagcctggaacacggcgcgcacatcatcgtcggc
acgccagggcggatcatggatcacctggagcgcggcgggctggcattgcaaggcctcaaa
acactggtgctcgacgaagccgaccggatgctcgacatgggctttttcgacgacatcgtg
acggtgattcgccaatgccctaaagaacgccaaaccctgcttttttccgcgacctacccc
gacggcatcgccaaactcagccagcagtttctgcgcaatccgaaagaaatcacgctgacg
gaacggcacgacaacagcaagattcgccagcgcttctatgaagtcgtcgaagacgaacgc
ttgcacgcggtaggcatgttgctgaatcactatcgtccggtgagcacgctcgcgttttgt
aataccaaacaacagtgccgggatctgctagatgtgctgcgggcgcaaggctttcatgcg
ctagcgctgcacggtgagctagaccagcgggagcgcgatcaggtgctgatccagttcgcc
aaccgcagctgctcggtgctagtggcaaccgacgtcgccgcgcgcgggctggatatcgcg
caactcgaagcggtgattaacgtcgacgtcacgcctgacccggaagtccacgttcaccgc
atcggccgcaccgggcgcgccgaccaggacggctgggcgctcagccttgccagcatgaac
gagatgggccgcgtgggcgggctggagcaggcgcaacggcgcgaagtcgaatggcatccg
ctggcggaactcagcgcggccagcaatgaaccgctgctgccccccatggaaacgctgcaa
attctcggcgggcgcaaagaaaaaatccgtccgggtgacgtgctaggcgcgctgactaaa
gatgcaggattttccagcgcgcagatcggcaagatcaacgtgacggagttttcgacttac
gtggccatcgaacgcggcgtggcccgcgatgcactgcgcaagctcaacgccggtaaagtc
aaaggcaagaaggtcaaagtgcggttgatggatgagtag
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