Paraburkholderia bonniea: QS306_15760
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Entry
QS306_15760 CDS
T09664
Name
(GenBank) sarcosine oxidase subunit alpha family protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pbon
Paraburkholderia bonniea
Pathway
pbon00260
Glycine, serine and threonine metabolism
pbon01100
Metabolic pathways
Module
pbon_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QS306_15760
Enzymes [BR:
pbon01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
QS306_15760
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
QS306_15760
BRITE hierarchy
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
HI0933_like
Pyr_redox_3
NAD_binding_8
Pyr_redox
FAD_binding_2
FAD_binding_3
AlaDh_PNT_C
GIDA
Thi4
DAO
Trp_halogenase
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
WJF91545
LinkDB
All DBs
Position
2:complement(517476..520499)
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AA seq
1007 aa
AA seq
DB search
MSQKNRLGTGGRINRAQPLCFTFNGRTYHGFQGDTLASALLANGVHFVARSFKYHRPRGI
FTAGVEEPNAIVQLECGAYTVPNARATEVELYQGLSATSVNAEPSLERDRMALNQHFARF
LPAGFYYKTFMWPRKWWPKYERRIRAAAGLGRAPQEPDAERYDKCYAHCDVLVVGGGPAG
LMAAHAAGATGARVMLVDDQRELGGSLLSRRVEIDGLMGLHWVEKITAELRRMPEVTLLT
RSNAFGYQDHNLVTVTQRLTEHLPVSLRKGSRELLWKIRARRVILATGAHERPLVFGNND
LPGVMLASAVSTYVHRYGVLPGRNAVVFTNNDDGYQCALNLKACGAQVTVLDARGQCQNA
GSLPEMARRAGVRVMPNAVVSVARGKRHVSSVEVASYLPSASGQGASVGAKLAELPCDLL
ALSGGWSPALHLFAQSGGTAHWHDEKACFVPGKAAQAECSIGAAAGEFSLAHALPLALDA
GLEAARAAGFTAARPASPRVAHLPSTPLVPLWLVGTLAAAARGPKQFVDWQNDVCAADIL
LAVREGFESIEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTLPETGTTTFRPNYTPV
SFGTFAGRELGEWLEPVRKTCLHEWHVEHGALFEDVGNWKRPWYYPRGAEEMHAAVAREC
LAVRQSVGMLDASTLGKIDIQGPDAAQLLNWAYTNPWSKLEVGKCRYGLMLDENGMVFDD
GVTVRLAEQHYMMTTTTGGAARVLSWLERWLQTEWPGLKVRLASVTDHWATFAVVGPNSR
KVLQKVCDEIDFSNAAFPFMSYRAGTVAGVGARVMRISFSGELAYEVNVPANFGRSVWQR
LMQAGAEFGITPYGTEAMHVLRAEKGYIIVGQDTDGSVTPHDLGMGGLVAKTKDFLGKRS
LARSDTAQEGRKQFVGLLAEDAALVIPEGSQIVARPFSGSTAPMLGHVSSSYYSPVLQRS
IALALIQGGLGKLGEQVTIPLASGRQVAATITSPVFYDTEGARQHVE
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaaaaccgtctgggcacgggtgggcggatcaaccgcgcacagcctctgtgc
ttcaccttcaatggccgtacctatcatgggtttcagggcgatacgctggcgtcggcgttg
ctggctaatggcgtgcattttgttgcgcgcagcttcaagtaccaccggccacggggcatt
ttcacggctggcgtcgaggagcccaacgcgattgtccagcttgagtgtggtgcttatacc
gtgcccaatgcccgggccactgaggtcgagctgtatcaagggctgagcgccaccagtgtg
aatgccgagccgagtctggagcgtgaccggatggcgcttaatcagcacttcgcccgtttt
ttgccggctggtttctactacaaaacttttatgtggccgcgcaaatggtggccgaagtat
gaaagacggatccgcgcggcggcgggcctgggccgtgcgccgcaggagcctgatgctgag
cgatacgacaagtgctatgcccattgcgatgtactggtggtgggcggcggcccggctgga
ttgatggcagcgcatgcggctggggcgacgggcgcgcgggtgatgctggtggacgatcag
cgtgaattgggcggtagtttgctgtcgcgccgggttgagatcgacgggctgatggggctg
cactgggtcgagaaaatcacggccgagctgaggcgtatgcccgaggtgacgcttctcacg
cgtagcaatgcgtttggctatcaggaccacaacctggtcactgtgacgcagcgtttgact
gagcatttgccggtttcgttgcgcaagggctcgcgcgaactgttgtggaagatcagggcg
cggcgcgtgattctggcgactggtgcgcatgagcggccgctggtatttggcaataacgat
ttgcctggcgtgatgctggcttcggcggtgtcgacctatgtgcatcgctatggcgtgctg
ccgggacgcaacgcggtggtgttcaccaacaacgatgacggctaccaatgcgcgctcaat
ctcaaggcctgcggtgctcaggtcaccgtgctggacgctcgcgggcaatgtcagaacgct
gggagcctgccggagatggcgcgccgtgcaggtgtcagggtgatgccgaacgcggtggtg
agcgtggcgcgcggcaagcggcatgtcagctcggtggaggtggcatcgtatctgcccagc
gcgtcaggccagggcgctagcgtgggcgcgaagctggctgagctgccgtgtgatctgctt
gcgctgtcggggggctggagccctgcgctgcatttgttcgcgcagtcggggggcacggcg
cactggcatgacgagaaagcgtgctttgtgccgggcaaggcggctcaggcggaatgcagc
atcggtgcggctgcgggtgaattcagcctggcgcacgcgttgcctctggcacttgatgct
gggcttgaagcggcccgcgcagcgggatttactgcggcgcggccagcatcgccgcgagtc
gcgcacctccccagcacgccgctggtgccactgtggctggtgggcacgctggctgcggcg
gcgcgtggcccgaagcagtttgttgattggcaaaacgatgtgtgtgccgccgatattttg
ctggccgtgcgtgaaggttttgaatccattgagcacgtcaagcgttataccgcgatgggt
tttggcaccgatcagggcaagctgggcaacatcaacggcatggcgattctggcgcaggca
ctgggcaagaccttgcccgaaaccggcacgacgacgttccgcccgaactacaccccagtg
agtttcggcactttcgcgggacgtgaactgggcgaatggctcgaacctgtgcgcaagact
tgcctgcatgaatggcacgttgagcacggtgcgctcttcgaggatgtgggcaactggaaa
cgcccctggtattacccgcgcggcgcggaggagatgcatgcagccgtggcccgtgaatgc
cttgcggtgcgccaaagcgtgggcatgctggatgcttcgacgctcggcaagatcgacatc
cagggcccggacgcggcgcaactgctgaactgggcttacaccaatccgtggagcaagctc
gaagtcggcaagtgccgttacggcttgatgcttgatgagaacggcatggtgtttgacgat
ggcgtgacggtgcgtctggctgagcagcattacatgatgaccaccacaaccggcggcgcg
gcacgtgtgttgagctggctggagcgctggctgcaaaccgaatggcctgggcttaaggtg
cggctggcgtcggtcaccgatcactgggcgaccttcgctgtagttgggcctaacagccgc
aaggtgctgcaaaaggtgtgtgacgagattgatttcagcaacgcggcgtttccgttcatg
agctatcgcgcaggcacggtggcgggtgttggcgcgcgcgtgatgcgcattagtttttcg
ggcgaactggcttatgaggtcaacgtgccggctaatttcggccgttcggtgtggcaacgg
ttgatgcaggcgggcgctgagtttggcatcaccccctatggcacggaggccatgcacgtg
ctgcgcgcggagaagggctacatcatcgttggtcaggataccgatgggtcggtcacgcct
catgatcttggaatgggcggactggtggctaaaaccaaggattttctcggcaagcgttcg
ctggcgcgcagcgataccgcgcaggaagggcgcaagcagtttgtcggcttgctggctgag
gatgctgcgctggtgattccggaaggcagccagatcgtcgccaggccgttctcgggaagt
accgcgccgatgctcgggcacgtgagctcgagttattacagcccggtgctgcaacgctcg
attgcactggctctgattcagggcgggctgggcaagctcggtgagcaggtgacgattcca
ttggccagcggccggcaggttgccgcgacgatcaccagccctgttttttatgacactgaa
ggagcacggcagcatgtggaatga
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integrated database retrieval system
