Paraburkholderia bonniea: QS306_16065
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Entry
QS306_16065 CDS
T09664
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pbon
Paraburkholderia bonniea
Pathway
pbon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QS306_16065 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbon03019
]
QS306_16065 (pnp)
03016 Transfer RNA biogenesis [BR:
pbon03016
]
QS306_16065 (pnp)
Enzymes [BR:
pbon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QS306_16065 (pnp)
Messenger RNA biogenesis [BR:
pbon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QS306_16065 (pnp)
Transfer RNA biogenesis [BR:
pbon03016
]
Prokaryotic type
tRNA degradation factors
QS306_16065 (pnp)
BRITE hierarchy
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KhpA-B_KH
UPF0181
S1_2
Motif
Other DBs
NCBI-ProteinID:
WJF91597
LinkDB
All DBs
Position
2:complement(585279..587429)
Genome browser
AA seq
716 aa
AA seq
DB search
MSMFNKVVKEFKWGQQTVRLETGEIARQASGAVLVDIDGTVVLATVVGARTAKPGQDFFP
LTVDYLEKTYSAGKIPGGFFRREGRPSEGETLTSRLIDRPLRPLFPEGFYNEVQVVIHVM
SINPEVPADIPALIGASAALAVSGLPFNGPVGAARVAYINNEYVLNPTRAQIKTSRLDLV
VAGTERAVLMVESEADQLPEDVMLGAVVFGHEQMQTAIDAIHELVREGGKPEWDWQPAAK
NEVLISRVSALAEADLLAAYQMRDKQARSAKLKEVYAATSARLEEEAAAAGTAAADKATV
GNVLFDIEARIVRSQILSGEPRIDGRDTRTVRPIEIRTGVLPRTHGSVLFTRGETQALVV
ATLGTRGDEQIIDALEGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRSLLP
CLPSAEEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTAAGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LEKMTSAVAGANTQLSEFAPRMITVKINPEKIRDVIGKGGSVIRALTEETGTTIDISEDG
LVTIASTSSEGMAEAKRRIEAITMDVEVGKVYEGTVLKLLDFGAIVNILPGKDGLLHISE
IANERIKDLNDYLKEGQRVKVKVIQTDEKGRVRLSAKALINDAAAGIAPAEPAPQQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgttcaacaaggtcgttaaagaatttaaatgggggcagcaaactgttcgtctc
gaaacgggtgaaatcgcccgtcaggcaagtggtgctgtgctggttgatatcgacggcacc
gtggtgctggcgaccgtggttggcgcgcggaccgcgaagccgggtcaggattttttcccc
ctgacagtcgattacctcgagaaaacctattcggctggcaagattcctggtggttttttt
cgccgtgaaggccgcccttcggaaggtgaaacgcttacctcccgtctgattgatcgtccg
ttgcgtccgctgtttcctgaaggcttctataacgaagttcaggtggtgattcacgtgatg
tcgatcaacccggaagtgccggctgacatccctgcgctgatcggcgcgtctgcggcactc
gcagtttctggcttgccgttcaatggcccggttggcgccgcgcgcgtggcctatatcaat
aacgagtacgtgctgaacccgacacgggcgcagatcaagacatcacgtcttgatctcgtg
gtggctggaacagagcgtgcggtgctgatggtcgaatcagaagccgaccaactgccggaa
gacgtgatgctgggcgcggtggtgttcggtcatgagcagatgcaaacggcgattgatgca
attcatgagctggtccgcgaaggcggcaagccggagtgggactggcagcctgcagcgaaa
aacgaagtattgatttcgcgtgtgagcgccctggctgaagcggatctgcttgctgcctat
caaatgcgcgacaagcaggctcgttcagcgaagctgaaagaagtttatgccgcaacgtcg
gcgcggcttgaagaagaagcggccgctgcgggcacagcggcggctgataaagccactgtt
ggcaatgtgttgttcgatatcgaagcccggatcgtgcgcagccagatcctgagcggtgag
ccgcgtattgacggacgtgatacccgcacggtgcgtccaattgaaattcgcacaggcgtg
ttgccgcgtactcatggctcagtgcttttcacccgcggtgaaacgcaagcgctggtagtg
gccacactcggaacgcgtggcgatgagcaaatcatcgatgcgctggaaggtgagtaccgc
gaccgcttcatgctgcactacaacatgccgccgttcgccacaggagaaacaggccgcgtg
ggttcgcccaagcgccgggaaatcggccatggccgccttgccaagcgctcgttgctgccg
tgcttgcctagtgcggaagaatttggttactcgattcgcgtcgtgtcggaaattaccgag
tcgaacggttcgtcatctatggcttccgtatgcggtggctgtcttgcattgatggatgcc
ggcgtgccgatgaaggctcacgttgcaggcatcgcaatggggttgattctcgagggcaac
aaatttgcggtgctgaccgatattcttggcgacgaagatcaccttggcgacatggatttc
aaggtggcgggtacggctgctggcgtgaccgcgctgcaaatggacatcaagatccagggc
atcacgaaggaaatcatgcaagtcgcactggcgcaggcgaaagaaggccgcatgcatatt
ctggagaagatgacttcggcggtggctggcgcgaatacgcagttgtcggaattcgctcca
cgcatgattaccgtgaagatcaatccggagaaaatccgtgacgtgatcggcaagggtggc
tcagtgattcgcgcattgactgaagaaactggcacgacgattgatatttcagaagatggt
ctggtgacgattgccagcaccagcagcgaaggcatggccgaagccaagcgccgtatcgaa
gccattacgatggatgtcgaagtgggcaaggtttatgaaggaaccgtgcttaagctgctg
gatttcggtgcgatcgtgaatatcttgccgggcaaggatggcctgttgcacatctccgaa
atcgctaacgagcgcatcaaggatctgaatgactatttgaaggaaggccagcgggtcaag
gtcaaggttattcagacggatgagaagggtcgtgtccgtttgtcagcgaaagcgctgatc
aacgacgctgctgccggtattgcaccagccgaaccagcgccgcaacagtaa
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integrated database retrieval system
