KEGG   Paludisphaera borealis: BSF38_00415
Entry
BSF38_00415       CDS       T04622                                 
Symbol
alkA_1
Name
(GenBank) DNA-3-methyladenine glycosylase
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
pbor  Paludisphaera borealis
Pathway
pbor03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pbor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BSF38_00415 (alkA_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbor03400]
    BSF38_00415 (alkA_1)
Enzymes [BR:pbor01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     BSF38_00415 (alkA_1)
DNA repair and recombination proteins [BR:pbor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BSF38_00415 (alkA_1)
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-ProteinID: APW59002
UniProt: A0A1U7CJ93
LinkDB
Position
545640..546284
AA seq 214 aa
MSPKAAPKLEKPVDPWAKAIRHLKRVDPQFKAVIQRVGPCGLAPREDRFGALVTAIVSQQ
ISTKAAASINERLHVLAGRPHDPRRLLELDETALRGVGLSGSKARYVLNVATAVADGSVP
VDRFDESWDDDRIIEALTSIKGVGVWTAHMFLIFVLNRPDVLPVGDLGVRAGLRDWHGLA
ELPKPSDCHALAEPWRPYRSVASWYLWRNGDAPS
NT seq 645 nt   +upstreamnt  +downstreamnt
atgagcccgaaagccgcgccgaagcttgagaagcccgtcgatccctgggcaaaggcgatc
cgccacctcaagcgagttgatcctcaattcaaggcggtcatccagcgggtcggcccatgc
ggcctggcgcctcgggaagaccggttcggggcgctcgtgacggcgatcgtatctcagcag
atctcgaccaaggccgccgcgtcgatcaacgagcggctgcacgttctggccggtcgtccc
cacgacccgcggcggctgctcgaactcgacgagacggcgctgcgcggcgtcggactgtcg
gggagcaaggcgcggtacgtgctcaacgtggcgacggccgtggccgacggctcggtcccc
gtcgatcgcttcgacgaatcatgggatgacgataggatcatcgaagcgttgacgtcgatc
aagggcgtgggcgtgtggaccgctcatatgttcctgatcttcgtgctcaaccgccccgac
gtcctccccgtcggcgacctgggcgttcgggcggggctccgcgactggcacggcctggcg
gaactgcccaagcccagcgactgccacgcgctggccgagccctggcggccctaccgatcg
gtggcgagttggtatctctggaggaacggcgacgcgccttcttag

DBGET integrated database retrieval system