Paludisphaera borealis: BSF38_00794
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Entry
BSF38_00794 CDS
T04622
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbor
Paludisphaera borealis
Pathway
pbor03420
Nucleotide excision repair
pbor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BSF38_00794 (pcrA_1)
03430 Mismatch repair
BSF38_00794 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbor03400
]
BSF38_00794 (pcrA_1)
Enzymes [BR:
pbor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSF38_00794 (pcrA_1)
DNA repair and recombination proteins [BR:
pbor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSF38_00794 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
BSF38_00794 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
APW59372
UniProt:
A0A1U7CKB6
LinkDB
All DBs
Position
1023887..1025971
Genome browser
AA seq
694 aa
AA seq
DB search
MRKITLKHKLPAGLDKQFADELNSSQRAAATAPDGYNLILAGPGSGKTRVITFRVGFLIA
RGVPADSILLATFTRRAAREMVGRLGELVGNQAGRVWAGTFHHVGNRLLRGAAKDLGFQS
NFTILDSEDQTDLLRLAMDDAGLVDKSKLAPKASQLQHLISFAINTRRPLAAVVESEAAD
QAEWLPEIEKVADAYARRKLASNCMDYDDLLTQWLRLLDEFPNRLEEQGRMFRHILIDEM
QDTNALQIEIVEKIAAAGRGNLTAVGDDAQSIYRFRGANYDNILKFPDRHLDARVFRLEV
NYRSTPQIVAFTEASIAHNQSGFPKQLVSARNDGPLPVVVATADVYEEAALVCQQILEAH
DQDVPLGRMAVLYRNHYDSVVLQGELLARNIPYTVRSGVRFFEQAHVKDVMAFLRVVLNP
RDEASWRRLFVLLPGVGPAKAGAVYQRIASEADPLKALATAETMAIVPSKSRGLFAAFVN
DLNLIRATDPEHHPARAIEAVLKGGYPGTIRQKYDKADNRIKDVEQFAVLAAKYDSLERL
LAELLLAGDVYGMDAAGSEDPQDVLVLSTVHQAKGLEWSHVFVVRLVDEGFPHRRAMDEP
GGEDEERRIFYVAVSRAMNELMLSYPSTISRGGYGPTVFSTPSRFLTEIRHDLYERVVLE
HEFDRLNADDDDDEGEPPWTGRPLKSQPDRDSKT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagatcacactcaagcataagctgcccgccgggctggacaagcagttcgccgac
gagctgaacagctcgcaacgggcggcggcgaccgcgcccgacggatacaatctgatcctg
gcgggcccgggctcgggaaaaacccgggtgatcacgttccgggtgggatttctgatcgcc
cgcggcgttcccgccgactcgatcctgctggcgaccttcacccgccgcgcggcgcgcgag
atggtcggtcggctcggggaactcgtcggcaatcaggccgggcgcgtctgggccgggacg
ttccatcatgtcggcaaccggctgctccgtggggcggcgaaggatctcggctttcagtcc
aacttcacgatcctcgacagcgaggaccagaccgacctgctgcgactggcgatggacgac
gcgggactcgtcgacaagagcaagctcgcgcccaaggcgtcgcagttgcagcacctgatc
agcttcgccatcaacacgcgacggccgctcgcggcggtggtcgagtcggaagccgccgac
caggcggaatggctgccggagatcgagaaggtcgctgacgcctacgcccgccgcaagctc
gccagcaactgcatggactacgacgacctgctgacccagtggctgcggctgctggacgag
ttccccaaccgcctcgaagaacagggacggatgttccgtcatatcctgatcgacgagatg
caggacaccaacgccctccagatcgagatcgtcgagaagatcgcggcggccggtcggggc
aacctcacggcggtcggcgacgacgcgcagtcgatctaccggttccggggcgcgaactac
gacaacatcctcaagttccccgaccgccacctggacgcgcgcgtcttccggctcgaagtc
aactatcgttcgacgccgcagatcgtcgcgttcaccgaggcgtcgatcgcgcacaaccag
tcgggatttcccaagcagctcgtctcggcccggaacgacggcccgctcccggtcgtcgtg
gccacggccgacgtctacgaggaagccgctctcgtctgccagcagatcctcgaagcccac
gaccaggacgttccgctgggcaggatggctgtcctctatcgcaatcattacgacagcgtg
gtgctccagggcgagctgttggcccgcaacatcccctacacggtccgcagcggggtccgg
ttcttcgagcaggcgcacgtcaaggacgtcatggcgttcttgagggtggtactcaacccg
cgcgacgaggcgtcgtggcggcgattgttcgtcctcttgccgggagtcggtccggccaag
gctggggccgtctaccagaggatcgcaagcgaggccgaccctctcaaggcgctggcgacc
gccgagacgatggcgatcgtgccttccaagagccgggggttgttcgccgcgttcgtcaac
gatctgaacctgatccgggcgaccgatccggagcaccacccggctcgggcgatcgaggcg
gtcctcaaggggggatatcccgggacgatccgccagaaatatgacaaggccgacaaccgg
atcaaggacgtcgagcagttcgccgtgctggccgccaagtacgacagcctggagcggctg
ctcgccgagctgcttctggccggcgacgtctacggcatggacgcggccggcagcgaagat
ccgcaagacgtgctggtactgagcacggtccaccaggccaaggggctcgaatggtcgcac
gtcttcgtcgtccgcctcgtcgacgagggattcccgcaccgtcgcgcgatggacgagccc
ggcggcgaggacgaagaacggcgcatcttctacgtcgccgtcagccgcgccatgaacgag
ctgatgctctcctacccttcgaccatcagccgaggcggctacgggccgaccgtcttctcg
acccccagccgcttcctcacggaaatccgccacgatctctacgagcgcgtcgtgctcgaa
cacgagtttgatcgtttgaatgcggatgacgacgacgatgaaggcgaaccaccgtggacc
ggccggccgttgaaaagtcagccggaccgagactccaagacctga
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