Paludisphaera borealis: BSF38_00993
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Entry
BSF38_00993 CDS
T04622
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pbor
Paludisphaera borealis
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbor03400
]
BSF38_00993 (addB)
Enzymes [BR:
pbor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSF38_00993 (addB)
DNA repair and recombination proteins [BR:
pbor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BSF38_00993 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
APW59566
UniProt:
A0A1U7CKX9
LinkDB
All DBs
Position
1276153..1279221
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AA seq
1022 aa
AA seq
DB search
MIRELALRSTPGDGEPRVRCWSDLWRWVASTVRNRPVLLSEASAAAVFDQAVRDVEADGR
LGAVADLVAWPGYRRRLRKRLHDWTVAEQRRDDEPTADEAASTAEWAVFERYRQLLTDLD
AEDEAGLSVWASHRLRERNARASTADGDRLVFLDFESRDRSHWRVLSDVLERPRSVDVTL
AYYDDPALAEVYLATGSTRERLLELGLVETPLPSNPSRPPGLRAVDEALFRDATPRDARI
ESSEGLAVWGGPDGEDFGRLVAREVRALCGQGVEPDEILIVFPRWSDQAEIVCEVVRKAG
APIHDASPRALDVEPSIAALLQAVRIPLEDWETELVVRFLRNGQVRPDWERVDRLALAEV
ASILRETPVFRGSRQILSALERAMGRTDEKDDQAREERRMDRLSKAHEVLKSLIGVLDPL
NQSRPWSEHASALRLAAGTLGLGTRDGRALETLWDALEDRAEVLEKLGRGAETVSWSEFV
DKLASVTAETLSPRSASTPGSIRTAVVEEVAGCRASHVLLVGLVEGSFPRRSAVQRFLEL
RPGDEPSPSARSAYARETLRFLQTLGSADRGVLLFYPTTDAKGQPLLRAGFLDDLLGALS
SSAESACHRSYARFHPALLDREDLAVTPADVRVLASALAGEEGRLAKLRSLAGDPAHRIV
LEGAAAALSALERRRRGTPYSEFEGLISDPAAVASIARSFSPETHTFSPSQLETYLSCPF
QFFSRHVLHLKPIEERDELAEDYTERGSRLHDILEEFEKRKAEAVDERSDEQLLVAAIDK
VLSRELVELSELDLGLRELEYGQIQRIINQYARQRSAYESDAPSSPVPQWFEFGFGDPDT
DHPDFKLSLGAEIVKLRGRIDRIDRIETEAGPKFRVIDYKSGTPPSSKEVADGRMLQLPL
YAMAVEKLLFESGDVGLLDVGYWGLKDKGYKPIVFQEWEEVRHTLVERVFHVIGQLRSGE
FVVDPRKDGCETYCEYRGVCRIRQVRAAAKSRDVGPTVSAETTVAGRKPRTPRKTKKTTD
ET
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgagctggccttgcgttcgacccccggtgacggcgagcctcgggtccggtgc
tggtccgacctctggcgatgggtcgcgtcgaccgtccgcaatcggccagttctgctttcg
gaagcgtcggccgccgccgtcttcgatcaagcggtgcgcgacgtcgaggccgacggccgg
ctgggcgccgtcgccgacctcgtcgcctggcctggctaccgccgacggctccgcaagcgg
ctccacgactggacggtcgccgagcagcgtcgcgacgacgagccgactgccgatgaggcc
gcctcaaccgccgaatgggccgtcttcgagcgctatcgccagttgctgaccgacctcgac
gccgaggacgaggccggcttgtcggtctgggcgtcgcaccggctccgcgagcggaacgcc
cgcgcgtcgaccgccgacggcgatcgcctggtcttcctcgatttcgagagccgcgaccgc
tcgcactggcgcgttctgtccgacgttctggagcgtccccgctccgtcgacgtgacgctc
gcctattacgacgacccggcgctcgccgaggtctatctggcgacgggctcaactcgcgag
cggctgctggagcttggcctcgtcgagacccccctgccctcgaacccgagccgtcccccc
ggtctgcgggccgttgacgaggcgctgttccgcgacgcgacgccgcgcgacgcgcgcatc
gagtccagcgagggcctggctgtctggggaggccccgacggcgaagacttcggccggctc
gtcgctcgcgaagttcgcgcgctgtgcggtcagggagtcgaacccgacgaaatcctgatc
gtgttcccgaggtggagcgatcaggccgagatcgtgtgtgaggtggttcgaaaggccggc
gcgccgatccatgacgccagtccgcgcgccctggacgtcgagccctcaatcgcggccttg
cttcaggccgtccgaatccccctcgaagactgggaaacagagctggtcgtccggttcctt
cgcaacggtcaagtccggcccgattgggaacgggtcgatcgactggcgctggccgaggtc
gcgtcgatcctgcgagagacccccgtgtttcgagggagccggcagatcctctcggcactc
gaacgggcgatggggagaaccgacgagaaggatgatcaggcccgcgaggaacggcggatg
gaccggttgtcgaaggctcatgaggtgctcaagagcctgatcggcgtcctcgacccgctg
aatcaatcgcgtccgtggtcggagcatgcttcggccctgcgtctggcggcggggacgctg
ggcctggggacgcgcgacggtcgggcgctcgaaacgctctgggacgccctcgaagaccgt
gccgaagtcctggaaaagctgggacgcggtgccgagacggtctcgtggagcgagttcgtc
gacaagctggcgtcggtgacggccgagacgctctcgccccgttcggcctcgacgcccggc
tcgatccgcacggcggtcgtcgaggaggtcgcgggctgtcgggcgtcgcacgtcttgctg
gtcggcctggtggaaggaagcttcccgaggcggtcggcggtgcagcggtttttggagctg
cggcccggcgacgagccgagcccttcggctcgttcggcctacgcgcgggagacgctccgg
tttcttcagacgctcggatcggccgatcggggcgtgctgctcttttatccgacgaccgac
gccaagggacagccgctgttgcgggccggctttctcgacgacctgctgggcgcgttgtcg
tcgtcggccgagtcggcctgtcatcggtcgtacgctcggttccaccccgcgctgctcgat
cgcgaggacctggcggtcacgccggccgacgtccgtgtgctggcctcggccctggccggc
gaggaaggccggttggcgaagcttcgctcgctggccggcgaccccgcgcaccggatcgtg
ctcgaaggcgcggcggccgcgctctcggccctcgaacgccgacgccgcggcacgccgtac
agcgaattcgaggggctgatcagcgacccggccgcggttgcctccatcgcccgctcattc
agtcccgagacgcacaccttcagcccaagccagctcgaaacctacctgagctgcccgttc
cagttcttcagcaggcacgtcctgcatctcaagcccatcgaggaacgcgacgagctggcg
gaagactacaccgagcgcggcagccggcttcacgacatcctggaggagttcgagaagcgc
aaggccgaggcggtcgacgagcgctccgatgaacagcttctcgtcgcggccatcgacaag
gtcctgtcgcgcgagctggtggagctgagcgagctggatctcggcctccgcgagttggag
tacggccagattcaacggatcatcaaccagtacgcgcgccagcggtcggcatacgagagc
gatgcaccgtcgtcgccggtgccgcagtggttcgagttcggcttcggagacccagacacc
gaccaccccgacttcaagctttcacttggcgctgagatcgtcaagctgcgaggccggatc
gaccggatcgaccggattgaaactgaggccggaccgaagttccgggtcatcgactacaag
agcggcacgcctcccagctcgaaggaggtcgccgacggccggatgcttcagcttccgctt
tacgcgatggccgtcgagaagttgttgttcgagagcggcgacgtcggcttactcgacgtc
ggttactgggggctcaaggacaaggggtacaagccgatcgtcttccaggaatgggaagag
gttcggcacacgctcgtggagcgagtgttccatgtgatcggccagttgcggagcggtgaa
ttcgtggttgatccgcgtaaggacggctgcgaaacgtattgcgaatatcgaggggtctgc
cggattcgccaggttcgagccgccgccaagagccgcgacgtcgggccgacggtctcggca
gaaacgacggtcgccgggcgcaagccgcgaaccccgcgcaagaccaaaaagacgacggac
gagacatga
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