Paludisphaera borealis: BSF38_01302
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Entry
BSF38_01302 CDS
T04622
Symbol
rapA_2
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
pbor
Paludisphaera borealis
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GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
APW59843
UniProt:
A0A1U7CLT8
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Position
1650494..1653610
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AA seq
1038 aa
AA seq
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MIILHASAWGGRFVLWGETSTGMPEQPTRKRKSTRGAEPARVSRSRFALDADHLAEAASS
EVPGVAFSKQPPRHWVAWLPSNERGALPSSPLLTDGPEDQGAVKIAPWETPALILTTEQA
VAVLLAAVDRTTWGPGVVVGKSLNYWATVLRFAGALVARQRYLPGLIADAVGPTFQAVWE
PVLTGAERLQAEHLARLMPHACRALGPDDGEPPRSSASDLLAETLGAVVDYLVRSASGPP
GKVQRRFPSLHDQWLYALRSPDGHMTGDPVELAKLAEQTRQWRQPLDVAASAPFRLCLRL
EEPEAESGKDADRWRIAYLLQAVGDPSLLVPAATAWKGSGREAAILERDGFRPREYLLSA
LGQAAALSPRIEASLKSAAPSGYTLDAAGAYEFLSEKAGVLEEAGFGVFLPAWWTRKGTK
LRLAARAVVASPKMTSKAGLSLDEVLKFRWEVALGDETLTLSELKALAKLKTPLVKVRGR
WVELNPEEIQAALAYWTAKGETSITAREAVHMALGAAKPPGSLDFEGVKASGWLADLLAQ
LEGASGFETLDPPDGFHGELRPYQTRGFSWLGFLGRWGFGACLADDMGLGKTIQTLALIQ
REWESRPARRRKPTLLICPTSVVGNWSKEAARFTPDLPVMVHHGLERARGADFKKQAAKH
ALVLSSYALLHRDFEVLKQPAWTALVLDEAQNIKNPQTKQAKAARALQAEHRIALTGTPV
ENHVGDLWSIIEFLNPGWLGTQAEFKRTFHVPIQVGRDPEAARRLQRLTAPFVLRRLKSD
KSIIADLPEKLEMKVFCTLTKEQGSLYAAVVEETAERIESTEGVQRKGIVLATLMKLKQV
CNHPAQFLGDHSAVSGRSGKLARLTEMLDEALSVGDRALVFTQFAEMGTLLKNHLQETFG
REVLFLHGATPKAQRDRMVERFQAKGDDGPPIFILSLKAGGTGLNLTAANHVFHFDRWWN
PAVENQATDRAFRIGQTRRVQVHKFVCVGTLEERIDAMIEDKKEVAGRVVGSGEAWLTKL
SNKELKDLFALRESALEG
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgataatccttcacgcctccgcctggggcggccggtttgtgctctggggcgagacgtcg
acgggaatgccggaacagccgacgcggaaacgaaagtcgacgcggggtgccgagcccgcg
cgggtttcacggtcccggttcgcccttgatgcggatcatctcgccgaggcggcgtcctcc
gaagtccccggcgttgcgttctccaagcagccgccgcggcactgggtcgcttggctgccg
tcgaacgagcgaggggcgttgccgtcgagcccgcttctgaccgacgggccggaggatcaa
ggcgcggtcaagatcgctccatgggagacgccggccctgattttgacgaccgagcaggcg
gtcgcggtcttactcgccgctgtcgaccggacgacctgggggccgggcgtggtcgtcggc
aagtcgctgaattactgggcgaccgtgttgcggttcgccggggcgctcgtcgcgcggcag
cggtatcttcccggcctgatcgcggacgccgtcggtccgacgttccaggcggtctgggag
ccggtgctgaccggcgcggagcggctccaggccgagcatctcgcccggttgatgccgcac
gcctgccgcgcgctcgggcccgacgacggcgagccgccgcggtcgtccgcatcggacttg
ctcgccgagactctgggggcggtcgtcgactacctggtgcggtccgcgtcggggccgccc
ggcaaggtccagaggcggtttccgagcctgcacgatcagtggctctacgccctgcgctcg
ccggacggccatatgacaggcgatcccgtcgagctggcgaagctggccgaacaaacgcga
cagtggcgtcagccgctcgacgtcgccgcgtccgcgccgttccggctctgcctgcggctg
gaagagccggaagccgaatcgggcaaggacgccgaccgttggcggatcgcctatctcctc
caggcggtcggcgacccgagccttttggtcccggccgcgaccgcgtggaaggggagcggg
cgcgaagcggcgatcctcgaacgcgacggcttccgaccgcgcgagtacttgctgtcggcc
ctcggccaggccgccgcgctgagccctcgaatcgaagctagcctgaaatcggccgcgcct
tcgggatacacgctcgacgccgccggggcgtacgaattcctctcggagaaggctggagtg
ctggaagaggctggcttcggcgtcttcttgcccgcctggtggacccgcaaggggaccaag
ctccggctggcggcacgggcggtggtcgcgtcgccaaagatgaccagcaaggccgggctg
tcgctcgacgaggtcctcaagttccgctgggaggtcgcgctgggggacgagactctaacg
ctcagcgagttgaaggccctggcgaagctcaagacgccgctcgttaaggtgcgcggccgc
tgggtcgagctgaacccggaagagatccaggcggctctcgcgtactggacggcgaagggg
gagacgtcgatcacggcccgggaggctgtgcacatggcgctcggcgctgcgaaacctccc
ggctcgctcgatttcgagggagtgaaagcgtcgggatggctcgcggacctactcgcccag
ctcgaaggggcttcgggcttcgagacgctcgacccgcccgacggcttccacggcgagctt
cggccctaccaaacgcgcggtttctcgtggctcggcttcctcggccgctggggcttcgga
gcctgcctggccgacgacatgggtttgggcaagacgatccagaccctcgccctgatccag
cgcgaatgggagtcgcgccctgcacggcgtcgcaagccgacgctcttgatctgcccgacg
tcggtcgtcggcaactggagcaaggaggccgctcggttcacgcccgatctccccgtgatg
gtccatcacggcctggagcgcgcccggggggccgacttcaagaagcaggccgcgaagcac
gccctggtgctgtcgagctacgcgcttctacaccgtgacttcgaagtcttgaagcagccg
gcgtggaccgcgctggtgctggacgaggcgcagaacatcaagaacccgcagaccaagcag
gcgaaggcggcgcgggcgctccaggccgagcaccgcatcgccctgaccggcacgccggtc
gagaaccacgtcggcgacctctggtcgatcatcgagttcctgaatcccggctggctcggc
acccaggccgagttcaagcgcacgttccacgttccgatccaggtcggtcgcgatcccgag
gccgcccgccggcttcagcgtctgaccgcgccgttcgtcctgcgacggctcaagtccgac
aagtcgatcatcgccgacctgccagagaagctggagatgaaggtcttctgtacgctgacc
aaggagcaagggtcgctttacgccgccgtggtcgaggagacggccgagcggatcgaatcg
accgagggggtccagcgcaaggggatcgtcctggcgacgctcatgaaactgaaacaggtc
tgcaatcatccggcgcaattcctcggcgaccactcggcggtctccggccgctcgggcaag
ctggcgcggctgacggagatgctcgacgaggcgctctcggtcggcgaccgcgctctggtt
ttcacccagttcgccgagatggggacgctgctcaagaaccatcttcaggagacgttcggc
cgcgaggtgctgttcctccacggcgcgacgcccaaggcgcagcgagaccggatggtcgag
cgattccaggccaagggggacgacgggccgccgatcttcatcctctcgctcaaggccggc
ggaacgggcttgaacctgacggccgcgaaccacgtgtttcatttcgaccgctggtggaac
ccggcggtggagaatcaggcgaccgaccgcgcgttccggatcggccagacgcggcgggtg
caggttcacaagttcgtctgcgtcggcacgctcgaagagaggatcgacgcgatgatcgag
gataagaaggaagtcgccggacgggtcgtcggcagcggcgaagcctggctcaccaaactc
tcgaacaaggagttgaaagacctgttcgcactgcgggaatccgcgctggagggctga
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