Paludisphaera borealis: BSF38_01561
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Entry
BSF38_01561 CDS
T04622
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
pbor
Paludisphaera borealis
Pathway
pbor02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSF38_01561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
Calx-beta
Beta_helix
DUF7507
Big_5
Integrin_A_Ig_3
CARDB
Chlam_OMP6
bMG10
NPCBM_assoc
Motif
Other DBs
NCBI-ProteinID:
APW60098
UniProt:
A0A1U7CMG3
LinkDB
All DBs
Position
1972369..1977336
Genome browser
AA seq
1655 aa
AA seq
DB search
MRLPVSVRGLSAGIRRRKSRGPTLEYFERRILLSTFTVENTADDGAGSLRWAILQVNADT
SPSTIQFAIPGAGVRTIALTSALEPIIHPVTIDARTQPAYSGQPLVKLDGSALPMIQNGL
VISAGDSTVAGLIISGFQGAGILLTTGGGNLVASNYIGVGPQGVSAQPNGDGVVILASSH
NTIGGGTGAGNLISGNQGNGVKITGTSLDTIGNQVSGNLIGTTLDGLRSLGNGSDGVLLS
GGRGAIIGGMGPRLGNVISGNKGNGLELNSGARESQITGNAIGLAIDGVHAVANLRDGVL
LNSAPANTIGGLTSQAANQISGNNGSGIRTQVDTTGLVVQGNQIGTDASGRLVLGNLGNG
LTLGTGSNSIGGMSMGAGNTIAYNGTGAVGSGVQLMGLVTGVTILSNSIHHNANLGINFG
DGPTLNHPTIHGPGPNNWQNYPILSTAQSDGQATLAEGTLSGGASQSYTIQFFWSDLPDP
SGFGEGKLYLGSISVTTDAAGAATFKLPTLGAVAPGGFISATATDAQGDTSEFSQAVLVQ
PVSDVSVQLTANPNPASPGAAITYTATVKNTGNLIAHHVVLTAQLPMGATIGSSSGSQGS
SPVIQGGTLTAALGSLLPGASAVVVVVVQPPAGYLGNLVSTAQVTMDEVDAHPGDNSTSV
SVRIATTADLNLKLTAGPPSGHVGDLLTYELTVSNAGPDPASNAVLILPFASNTSYVSAS
GTQGAGVLQSDRLIVNLGSIASGGQARITVVLKATGLGTIASTASVTSDAYDPNLNDDFA
SLATMIRPQADLRLVMQAPPVAADGYNVVYGVTIFNAGPDAAEGVTIQDLLPSRTAYVAA
SVDGGGAVSFANGIVTAVVGHLASGASTTLWIVAVPSLSVGTTLINAAHVGSTVDDPNDA
DNSDWRQTPVRPLGDLAVAMLPMSPSAPRGQPATFGVLVVNQGPSTEPNAVLSIPLPDWA
NFVSASSNQGAPPALAGGVLTARLGTLEPGGMARLTLVLTPKTSATGPFTVTAAVQGDDA
DFNQVNNTAVASVTLAPSSDLSVVVTPPSGPVHERSIFAYSVVVTANGPDDATGVAIRAP
LPAGVEFVSAASSQGPPPQLDAGIVVAQVGSLAVGQSAALTVFVRPTAPADSTLSLPGSA
VEDPFNPTSGVASPANVMVQPTVDLAVSLTSLQAQTDVGQYVTWVSSVANWGPSPATGVV
LNLPLANAWAYVASTTTQGFVQSAAGQVSVQLGTLAPGAVATVVLVLTPTVAGTSSLSAL
VGGDQYDLNPADDQASATVTVQESPGAIEFSQPSFSVPENAGLATIPVYRTLGARGTVTV
PYATFGGNATPGIDYLPVSGVLSFGPGETVKYITVPVLPNPHDNHDEGVGLYLGAPTGGA
VLGGRYAVPLTIQDIDPDFTPPQVQWVHLNGDSTSITSLTIGFSEPLSPGPAFSSTGYGI
LDLGASGVYGAGDNSWIAFSAPSYDPSSQTVTITPTQPLTTGRNYAIRLVGTGPSAITDL
AGNPLGGGVDYASLFARGASLNYTDSIGNLVSFQVTGGGFLDVTRNVAGDAQVVTLQQGA
PGYSVLSGSVARQYGRGTGVTAVGAIEGLGAFGQIRVNLKSPPFLVKNYPFALSTGKPIP
GASRQPINPRVPPIRPRPVAVRPVPAPKVVALRHR
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttcccgtttcagtccgtggcttatccgctggcattcgacgacgtaagtcgcgg
gggccgacgcttgaatattttgaacggcggatcttgctctcgacgttcacggtcgagaac
acggcggacgacggcgcgggctcgctgcgctgggcgatcctccaggtcaacgccgacacg
tcgccgagcacgatccagttcgccattccgggcgcgggggtgcggacgatcgcgctgacc
tcggcccttgagccgatcatccacccggtgacgatcgacgctcggacgcagccggcctat
tcgggccaaccgctcgtcaagctcgacgggtcggccttgccgatgattcagaacggcctg
gtgatctcggccggcgacagcacggtggccggcctgatcatctcggggttccagggcgcg
ggcatcctcctgaccacgggaggcgggaacctcgtcgcttcgaactacatcggagtcggt
ccccagggggtctccgcgcagcccaacggcgacggcgtggtgatcctcgcgtcgtcgcac
aacacgatcggcggcgggaccggcgcgggaaatctgatctccggcaaccaaggcaacggc
gtcaagatcacgggcacgtcgctcgatacgatcggcaaccaggtctcgggcaatctcatc
ggcacgacgctcgacggcttgcgatcgctgggcaacgggtcggacggcgttctgctctcg
ggaggccgcggcgcgatcatcggcgggatgggccccaggctgggcaacgtgatctccggc
aacaaggggaacggcctggagctgaattccggcgcgcgcgagagccagatcacggggaac
gcgatcggtctggcgatcgacggggtgcacgccgtggccaaccttcgcgacggggtgctg
ctcaactccgcgccggcgaacacgatcggcgggctcacgtcccaggcggccaaccagatc
tccggcaacaacggcagcggcatacgaacgcaggtcgacacgaccggcctggtggtccag
ggcaaccagatcggcaccgacgcctcgggccggctggtcctgggcaatctcggcaacggc
ctcactctcggcaccggatcgaactcgatcggcgggatgagcatgggggccggcaacacc
atcgcgtacaatggcacgggcgcggtcgggtcgggcgtccagctcatgggactcgtcacc
ggcgtgacgatcctctccaactcgatccaccacaacgccaatctcggcatcaacttcggc
gacggaccgaccctcaatcatccgacgatccatggtcccgggcctaacaactggcagaac
tacccgatcctgtcgacggcccagagcgacggccaggcgacgctggccgaggggaccctc
tcgggcggagcgtcgcagtcgtacacgatccagtttttctggagcgatctgcccgatccc
tcggggttcggcgagggaaaactgtatctcgggtcgatttcggttacgaccgacgcggcc
ggcgcggcgaccttcaagctgccgacgctcggtgccgttgcgcccggcgggtttatttcg
gcgaccgccaccgacgcccagggcgacacgtccgagttctcgcaagccgtgctcgtccaa
cccgtctccgacgtcagcgtccagctcacggcgaatcccaaccccgcgtccccgggcgcg
gcgatcacgtatacggcgaccgtcaagaacaccggcaatctcatcgcccatcacgtcgtc
ctgaccgctcagctccccatgggagcgacgatcggctcgtcgtcgggctcgcaggggtcg
tcgcccgtcatccagggagggacgctcaccgccgccctgggctcactgttgccgggagcg
tcggccgtcgtggtcgtcgtggttcaacccccggctggttacttggggaacctcgtcagc
acggctcaggtgacgatggatgaggtcgacgctcatcccggcgacaactcgacgagcgtc
tcggtccgcatcgcgacgacggccgacctgaacctcaagctgaccgccgggcccccctcg
ggccacgtcggcgacctcctcacctacgagctgaccgtctcgaacgcgggaccggacccg
gcgtcgaacgcggtcctcatcctccccttcgccagcaacacctcgtatgtgagcgcctcg
ggaacgcaaggggcgggcgtgttgcagtcggaccggctgatcgtcaatctgggctcgatc
gcgtcgggcggccaggctcggatcacggtcgtcctgaaggcgacgggcctggggacgatc
gcctcgaccgcgagcgtcacgagcgacgcctacgatccgaatctgaacgacgacttcgcg
agcctggcgacgatgattcgcccccaggccgacctccggctcgtcatgcaagcgcccccg
gtcgccgccgacggctacaacgtcgtgtacggggtgacgattttcaacgcgggtcccgac
gccgccgagggcgtcacgatccaggatctgttgccgtcgcggacggcgtacgtggcagcc
tcggtcgacggcggcggcgcggtgagcttcgcgaacgggatcgtcacggcggtcgtcggc
cacctggccagcggcgcatcgacgaccctctggatcgtcgcggttcccagcttgtccgtg
gggacgactctgattaacgcggcccacgtcggaagcacggtcgacgaccccaacgacgcc
gacaactccgactggcgccagacgcccgtccgccccctcggcgacctggccgtggccatg
ctccccatgtcgccgtcggcgccgcgcggccagccggcgacgttcggcgttctggtcgtc
aatcagggcccttcgaccgaaccgaacgccgtgctctcgatcccgcttcccgactgggcg
aattttgtgtcggcctcgtccaaccagggcgcgccgccggcgctcgccggcggggttctc
accgcgcggctggggacgttggagccgggcggaatggcgcggctgacgctcgtgttgact
cccaaaacttcagcgacgggtccgttcacggtcacggccgccgtgcagggcgacgacgcg
gatttcaaccaggtcaacaacacggccgtcgcaagcgtcacgctcgcgccgtcgtccgac
ctgtcggtcgtcgtgacgccgccgtccgggcccgtgcacgagcggtcgatcttcgcctac
tcggtggtcgtgaccgcgaacgggcccgacgacgctaccggagtggcgatccgggcgccg
ttgccggccggcgtcgagttcgtctccgccgcgtcgagccagggaccgccgccgcagctc
gacgcgggaattgtcgtcgcgcaggtcggaagccttgccgtcggtcagtcggcggccttg
accgtcttcgttcggccgaccgccccggccgactcgactctgtcgctgccgggctcggcg
gtcgaggacccgttcaatccgacttccggcgtcgcctctcccgccaacgtcatggtccag
ccgacggtcgacctcgccgtcagcctgacgtccttgcaggctcagaccgacgtcggccag
tacgtcacctgggtttcgagcgtcgccaactgggggccgtcaccagccacgggcgtcgtc
ctcaacctgccgctggcgaacgcctgggcctacgtcgcctcgacgaccactcaggggttc
gttcagagcgccgccggccaggtctcggtccaactggggaccctggcgcccggggccgtc
gcgaccgtcgtgctcgttttgacgccgaccgtcgccggaacgagcagcctgtcggccctc
gtcgggggcgatcagtacgatctgaacccggccgacgatcaggcctccgcgaccgtcacg
gtccaggagtcgcccggggcgatcgagttctcgcagccttccttcagcgtgcccgagaac
gccggcttggcgacgatccccgtctatcgcaccctgggcgcgcgcgggacggtgacggtg
ccgtacgcgacgttcggcggcaacgcgacgcccgggatcgattacctgccggtatcgggc
gttttgtcgttcggccccggcgagactgtcaagtacatcacggttccggtcctccccaac
ccgcacgacaaccacgacgagggcgtcggactttacctcggagcgccgaccggcggcgcc
gtgctcggcggccgttacgccgtccctcttacgattcaagacatcgatcccgacttcacc
ccgccgcaggtccaatgggtccacctgaacggcgactcgacatcgatcacaagtctgacg
atcggcttcagcgagcccctcagccccggcccggccttcagcagcacgggttacggcatt
ctcgatctcggcgcgagcggcgtctacggggcgggcgacaacagttggatcgcgttctcc
gcgcccagctacgatccgtcgtcccagaccgtcacgatcacgcccacccagccgctgacc
actggccgtaattacgcaatccgactcgtggggaccggtccctccgcgatcaccgacctc
gccggcaatccgctcggcggcggtgtcgactatgcgagcctgttcgcccggggggcgtcg
ctgaactatacggactccatcggcaatctggtctcgttccaggtcaccggcggcgggttc
ctggacgtcacgcggaacgtcgcgggcgacgcccaggtcgtgacgctccagcagggcgcg
ccgggatattccgtcctctcgggcagcgtcgcccggcagtacgggcgcggcaccggcgtc
acggcggtgggcgccatcgagggtttgggcgcgttcgggcagatccgcgtcaacctcaag
agtccgccgttcctcgtcaaaaactatccgttcgcgctttcgaccggcaagccgatcccg
ggagcgagccggcaaccgatcaacccgcgcgtcccccccattcgaccgaggcccgtcgcc
gtccgcccggtccccgcgccaaaggtcgtcgcgctccgccaccgctga
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