Paludisphaera borealis: BSF38_01587
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Entry
BSF38_01587 CDS
T04622
Symbol
rfbB_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pbor
Paludisphaera borealis
Pathway
pbor00521
Streptomycin biosynthesis
pbor00523
Polyketide sugar unit biosynthesis
pbor00525
Acarbose and validamycin biosynthesis
pbor00541
Biosynthesis of various nucleotide sugars
pbor01100
Metabolic pathways
pbor01110
Biosynthesis of secondary metabolites
pbor01250
Biosynthesis of nucleotide sugars
Module
pbor_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BSF38_01587 (rfbB_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BSF38_01587 (rfbB_1)
01055 Biosynthesis of vancomycin group antibiotics
BSF38_01587 (rfbB_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BSF38_01587 (rfbB_1)
00525 Acarbose and validamycin biosynthesis
BSF38_01587 (rfbB_1)
Enzymes [BR:
pbor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BSF38_01587 (rfbB_1)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
adh_short
Motif
Other DBs
NCBI-ProteinID:
APW60123
UniProt:
A0A1U7CML4
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All DBs
Position
2009800..2010732
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AA seq
310 aa
AA seq
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MRTVITGGAGFVGSHLCERFLDDGDEVVCVDNLLTGSLKNIDQLAADPRFRFVRHDISEP
IELDGPVDNVLHFASPASPVDYLAHPIPTLKVGSLGTHNALGLAKAKDARFLLASTSEIY
GDPDVHPQREDYWGNVNTIGPRGCYDEAKRFAEAITMAYHRFHGVKTHIVRIFNTYGPRM
RLNDGRVLPNFMKQALRGDPITIYGKGEQTRSFCYVTDLVDGIHRLLKADYALPVNIGNP
SEITVHQLAEEIIALVEGTKSRIVYNDLPEDDPKRRKPDITKAQTLLGWNPIVDRPDGLK
RTLAYFRSVV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
ttgagaacggtcatcaccggaggagccgggttcgtcggctcgcatctttgcgagcggttt
ctcgacgacggcgacgaggtcgtctgcgtcgacaatttgctgacggggtcgctcaagaac
atcgatcagctcgcggccgacccgcggttccggttcgtgcggcacgacatctccgagccg
atcgaactcgacggcccggtcgacaacgtgcttcacttcgcgagccccgccagccccgtc
gactacctcgcccacccgatcccgaccctcaaggtcggctcgctcggcacccacaacgcg
ctcgggctggccaaggccaaggacgcgcggttcctgctggcgagcacgtcggagatttac
ggcgatcccgacgtccacccgcagcgcgaggactactgggggaacgtcaacacgatcggc
ccgcgcggctgctacgacgaggccaagcggttcgccgaggccatcaccatggcctaccac
cggttccacggcgtgaagacgcacatcgtccgaatcttcaacacctacggccctcggatg
cgccttaacgacggccgcgtgttgcccaacttcatgaagcaggccctccgcggcgacccg
atcacgatctacggcaagggtgaacagacccggagcttctgctacgtgaccgacttggtc
gacggcatccaccgcctgctcaaggccgattacgcgctgccggtcaacatcggcaacccg
tcggagatcaccgtccaccagctcgccgaggagatcatcgcgctcgtcgaggggaccaag
agccggatcgtctacaacgacctccccgaagacgaccccaagcgccggaagcccgacatc
accaaggcccagaccctgctcggctggaacccgatcgtcgaccgccccgacggcctgaaa
cggacgctcgcctacttccgttccgtggtctga
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