Paludisphaera borealis: BSF38_01765
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Entry
BSF38_01765 CDS
T04622
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbor
Paludisphaera borealis
Pathway
pbor03410
Base excision repair
pbor03430
Mismatch repair
pbor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSF38_01765 (recJ)
03430 Mismatch repair
BSF38_01765 (recJ)
03440 Homologous recombination
BSF38_01765 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbor03400
]
BSF38_01765 (recJ)
DNA repair and recombination proteins [BR:
pbor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BSF38_01765 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BSF38_01765 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BSF38_01765 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
PhoU
Motif
Other DBs
NCBI-ProteinID:
APW60297
UniProt:
A0A1U7CMZ5
LinkDB
All DBs
Position
complement(2262961..2264796)
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AA seq
611 aa
AA seq
DB search
MAASTTDVGDLRENTAAMTTRWRLKPFDSHQTAALSRAVGVAPLVAQALINRGITEPDRA
RVFLESRLSGLNDPALLPGAVEAADRIVRSIREDRSIVIYGDYDVDGVCGTSVLWAALKL
AGAKRVSYYIPHRVEEGYGVNGDAVRKIAADHPGALLVTVDCGISAVVEARLARELGLEM
IVTDHHTIGEELPAAEVLVHPRLPGGSYPFGDLCGAAVAFKLAWQICKSFGDGKKASPHL
RDYLVESLGLVALATIADVVPLNDENRVLVRHGLAGIMGAPTTGMKALMRVAGCLGRSKL
SAGTVGFNLAPRINAAGRLERAMRAVEMLTTGDGRLADEIADELNVVNARRQEVEREILH
QALEQIRGEGGLKDRGALVLGRKGWHPGVIGIVASRLVDIYHRPTIIVAFGDEFAQGSAR
SVPGFNVYDAIKDCSDGLLSFGGHSAAAGVRMTEDHFPRFAELFDERCRTSLTPELREKV
LHIDAEVPLAMLSLPVVEDLEKLEPHGMGNPRPLFLASQVRVVGEPRAVGDQKKHLQLKL
GQGGSVFKAIGWNLAEKGKDLAHDVSCSVVFHPCVDEWNGYRRVQLEIRDFAVTADLARV
AEPAAVVGAEA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcgacgaccgacgtcggcgacttgcgggagaacacagccgcgatgacgacc
cgctggcggctcaagccgtttgattcacaccagaccgccgcgctcagtcgggccgtcggc
gttgcgcctctggtcgctcaagcgctgatcaaccgggggatcaccgagcccgaccgggcg
cgggtgttcctggaatcgcggctcagcggcctgaacgaccccgcgctgctgcccggcgcg
gtcgaggccgccgatcggatcgtccggtcgatccgcgaggatcggtcgatcgtgatctac
ggcgattacgacgtcgacggcgtgtgcggcaccagcgtgctctgggccgcgttgaagctc
gccggggcgaagcgggtctcgtactacatcccccaccgggtcgaggaagggtacggggtc
aacggcgacgccgtccgaaagatcgccgccgaccaccccggcgcgcttctggtcacggtc
gactgcggcatctcggccgtcgtcgaggcccgactggcgcgcgagctgggcctggaaatg
atcgtgaccgaccaccacacgatcggcgaggaactgccggcggccgaggtgctggtgcat
ccgcgcctgccggggggctcgtatccgttcggcgacctctgcggcgcggcggtcgccttc
aagctggcctggcagatctgcaagagcttcggcgacggcaagaaggcgtcgccgcatctg
cgcgactacctcgtggaatcgctcggcctcgtcgccctggccacgatcgccgacgtcgtc
cccctcaacgatgagaaccgggttctcgtgcggcacggcctggccggcatcatgggggcg
ccgacgactgggatgaaggcgctcatgcgggtggcgggctgcctcggtcggtcgaagctg
tcggccggcacggtcggcttcaacctcgcgcctcggatcaacgcggcggggcggctcgaa
cgcgcgatgcgggcggtcgagatgctcacgaccggcgacggacgactcgccgacgagatc
gccgacgagctgaacgtggtcaacgcccgccgccaagaggtcgagcgcgagatcctccat
caggcccttgagcagatccggggcgaagggggcctcaaggatcgcggagccctcgtgctc
ggtcgcaaggggtggcatccgggggtcatcggcatcgtcgccagccggctggtcgacatc
taccaccggccgacgatcatcgtcgcgttcggcgacgagttcgcgcagggctcggcgcgg
tcggtccctgggttcaacgtctacgacgccatcaaggactgctcggacggtctgctgtcg
ttcgggggccactcggcggcggccggcgtgcggatgaccgaggaccacttcccccgattc
gccgagctgttcgacgaacgatgtcggaccagcctcacgcccgagcttcgcgagaaggtg
ctgcatatcgacgccgaggtcccgctcgccatgctgagcctccccgtcgtcgaggatctg
gagaagctcgaaccgcacggcatgggcaatccccggccgctgttcctcgcgagtcaggtg
cgggtggtcggcgagccccgcgcggtcggcgaccagaagaagcacctccagctcaagctc
ggccaggggggctcggtcttcaaggcgatcggctggaacctggccgagaaggggaaggac
ctcgcccacgacgtctcgtgcagcgtcgtcttccacccttgcgtcgacgagtggaacggc
taccgtcgggtccaacttgaaatcagggatttcgccgtgaccgcggacctggcgcgcgtc
gccgagccggccgcggtcgtcggggctgaagcctga
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