Paludisphaera borealis: BSF38_03072
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Entry
BSF38_03072 CDS
T04622
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbor
Paludisphaera borealis
Pathway
pbor00300
Lysine biosynthesis
pbor00470
D-Amino acid metabolism
pbor01100
Metabolic pathways
pbor01110
Biosynthesis of secondary metabolites
pbor01120
Microbial metabolism in diverse environments
pbor01230
Biosynthesis of amino acids
Module
pbor_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BSF38_03072 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BSF38_03072 (lysA)
Enzymes [BR:
pbor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BSF38_03072 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
APW61554
UniProt:
A0A1U7CRI2
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Position
3926851..3928134
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AA seq
427 aa
AA seq
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MEAFQYRGNELYCEGVSVAELAKQYGTPLYVYSQAALVGSLKALQDAYAEVDPLICYSVK
ANSNLGVLKVLGAHGSGFDVVSGGELFRVQKAGGDPGMTVFAGVGKSDPEIAQAIEAGVL
MFNVESEAELASIARVAAGMNRVAPIALRVNPDVDPKTHRYTSTGQKESKFGLDIERALR
IAETVKDLPSLTMIGMHMHIGSQITTVEPYAKAVAKGVELIAKLRAMGHPIAWYNMGGGY
GIAYRGPEAKPVSEFAEAILPGLKATGCRLAIEPGRVIAGNAGILVSRVLYTKQSGDKRF
LIQDAAMNDLIRPALYESFHRIWPVTVPQGLPAPPADYEAAIEGAEPWDVVGPICESGDF
FAKDRALPPLGPGALLATFSAGAYGMVMASNYNTRPRAAEILVNGDGASLVRRRETLDDL
VAQEVGL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggaagcctttcaataccgcggcaatgagctttactgtgaaggcgtttcggtggccgaa
ctggccaagcagtacgggacgccgctgtacgtgtacagccaggcggctctggtgggctcg
ctgaaggcgctgcaagacgcctacgccgaggtcgacccgctgatctgctactcggtgaag
gcgaactcgaacctgggcgtgctgaaagtgctgggcgcgcacggcagcgggttcgacgtg
gtttccggcggcgagctgttccgggttcagaaggccggcggcgacccgggcatgacggtg
ttcgccggggtgggcaagagcgaccccgagatcgcccaggcgatcgaggccggggtcttg
atgttcaacgtcgagagcgaggccgaactcgcgtcgatcgcccgggtggcggcggggatg
aaccgggtcgcgccgatcgcgctgcgggtcaatcccgacgtcgatccgaaaacgcaccgg
tacacctcgaccggccagaaggagtcgaagttcgggctcgacatcgagcgcgcgttgcgg
atcgccgagacggtcaaggatctgccgagcctgacgatgatcggcatgcacatgcacatc
ggctcgcagatcacgaccgtcgagccgtacgccaaggcggtggccaagggggtcgagctg
atcgccaagctgcgggcgatgggccatccgatcgcctggtacaacatgggaggcggctac
ggcatcgcctatcgaggccccgaggccaagccggtgagtgaattcgccgaggcgatcctg
ccggggctgaaggccaccggctgccggctggcgatcgagcccgggcgggtgatcgcgggc
aacgccggcatcctggtcagtcgtgtgttatataccaagcagtcgggcgataagcgattt
ttgattcaggacgcggcgatgaacgacctgatccgccccgcgctctacgaatcgttccac
cggatctggccggtgacggtcccgcaaggtctgccggcgcccccggccgactacgaggcc
gccatcgaaggggccgagccgtgggacgtcgtcgggccgatctgcgagagcggcgacttc
ttcgccaaggaccgcgccttgcccccactgggcccgggcgcgcttctggccacgttctcc
gccggcgcctacgggatggtgatggcctcgaactacaacacgcgcccccgcgccgccgag
attctcgttaacggcgacggcgccagcctcgtccgccgccgcgagaccctcgacgacctc
gtggcccaggaagtcggattgtaa
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