Paludisphaera borealis: BSF38_03322
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Entry
BSF38_03322 CDS
T04622
Symbol
rfbB_2
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pbor
Paludisphaera borealis
Pathway
pbor00521
Streptomycin biosynthesis
pbor00523
Polyketide sugar unit biosynthesis
pbor00525
Acarbose and validamycin biosynthesis
pbor00541
Biosynthesis of various nucleotide sugars
pbor01100
Metabolic pathways
pbor01110
Biosynthesis of secondary metabolites
pbor01250
Biosynthesis of nucleotide sugars
Module
pbor_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BSF38_03322 (rfbB_2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BSF38_03322 (rfbB_2)
01055 Biosynthesis of vancomycin group antibiotics
BSF38_03322 (rfbB_2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BSF38_03322 (rfbB_2)
00525 Acarbose and validamycin biosynthesis
BSF38_03322 (rfbB_2)
Enzymes [BR:
pbor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BSF38_03322 (rfbB_2)
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Ortholog
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
adh_short
NmrA
Motif
Other DBs
NCBI-ProteinID:
APW61793
UniProt:
A0A1U7CSE3
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All DBs
Position
complement(4238666..4239676)
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AA seq
336 aa
AA seq
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MSSSIKRILVTGGCGFIGANFVRMELEQDPGLSITNLDALTYAGNPDNLADLAAEPRYRF
VKGDVADRPFIMKLVAEGGFDALVHFAAESHVDRSIEDATPFLRTNVIGTQNLLDAARAA
KVPRYVQVSTDEVYGTLGPDDPAFTEDTPLTPNSPYSASKAGADLLVRAAFHTHGMNVVT
TRCSNNYGPYQFPEKLIPLFVTNALADIPLPVYGDGKQVRDWIHVLDHCRGVDAALRKGI
SGEVYNFGGRSERYNMDVTKAVLQLTGKPDTLIRYVTDRPGHDRRYAVDCAKAESELGWT
QTVTFEKGLADTVAWYKANAAWVDRVKSGAYRNQEA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctcgatcaagcggattctggtgaccgggggttgcgggttcatcggggccaac
ttcgtgaggatggagctggagcaggaccccggcctatcgatcacgaacctcgacgccctg
acctacgccggcaatcccgacaacctcgccgacctcgccgccgagccgcgctaccggttc
gtcaagggggacgtcgccgaccggccgttcatcatgaagctggtggccgaggggggcttc
gacgccctggtccacttcgcagccgagagccacgtcgaccggtcgatcgaggacgccacg
ccgttcttgcggaccaacgtcatcggcactcagaacctgctcgacgccgcccgcgcggcg
aaggtcccgcggtacgtccaggtctcgaccgacgaggtctacggcacgctcggccccgac
gacccggcgttcaccgaggacaccccgctcacgcccaacagcccgtactcggccagcaag
gcgggcgccgacctgctcgtccgcgccgcgttccacacccacggcatgaacgtcgtcacc
acccggtgctcgaacaactacgggccgtaccagttccccgagaagctgatcccgctgttc
gtcaccaacgccctggccgacatccccctgccggtctacggcgacggcaagcaggtccgc
gactggatccacgtcctcgaccactgccggggggtcgacgcggccctccgcaaggggatc
agcggcgaggtctacaacttcggcggccgcagcgaacggtacaacatggacgtgaccaag
gccgtgctccagctcaccggcaagcccgacaccctgatccggtacgtcaccgaccgcccc
ggccacgaccgccgctacgccgtcgactgcgccaaggccgagtcggagctgggctggacc
cagaccgtgacgttcgagaagggcctggccgacaccgtcgcctggtacaaagcgaacgcg
gcctgggtcgatcgagtgaagtcgggcgcgtatcgtaaccaggaagcgtga
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