KEGG   Paludisphaera borealis: BSF38_04343
Entry
BSF38_04343       CDS       T04622                                 
Symbol
uvrA_3
Name
(GenBank) UvrABC system protein A
  KO
K03701  excinuclease ABC subunit A
Organism
pbor  Paludisphaera borealis
Pathway
pbor03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pbor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BSF38_04343 (uvrA_3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbor03400]
    BSF38_04343 (uvrA_3)
DNA repair and recombination proteins [BR:pbor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BSF38_04343 (uvrA_3)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BSF38_04343 (uvrA_3)
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind UvrA_inter AAA_21 AAA_16 nSTAND1 AAA_29 RsgA_GTPase DnaJ_CXXCXGXG AAA_22 AAA_25 AAA_33 Viral_helicase1 MeaB AAA_15
Other DBs
NCBI-ProteinID: APW62790
UniProt: A0A1U7CV16
LinkDB
Position
5615594..5618416
AA seq 940 aa
MPTPRSESWIRLRGARTHNLRAIDLDLPLGRLIAVTGVSGAGKSSLAFDTLYAEGQRRYV
ETFSAYARQFLEPLEKPDADRIESIPPAIALAARESRPSGRSTVGTITELHDYLGLLFTR
HGRVVCRTCGEPVVPATPRSVSQAIETLPAGHRYEVVYPVEILAETDVEALGRGLLEQGL
TRVRLGDRLIDLTTESLNVGRTEATPAVQIEVVVDRLTRGKDSIRRRLDSIETAFTKGLG
RCRIVTGSDSWTFVRGWRCSRCGTDHLEPQPNLFRYTSPLGACPRCEGLGSVVDLDMAKI
VPDPSKSLREGAVAAWNTPAHRGLRDQLIVEGPALGLPVSVPFQNLDAEQVRILVEGVPA
AGFPGLAGFFERLDRKSYKVAVRVFLSRWRRYRTCPDCQGARLRPEALAVRIEGTNIAEF
SALSVGRARELLESWGGLDDAGMGRLRAPIAARLDYLTRIGVGYLTLDRPSRTISAGELR
RVTMVKTLGSGLVGTLYVLDEPTIGLHAHDVGRLVGVLQALRDEGNTLVVVDHEADVVRA
SDHVVDLGPGAGDAGGRVLYSGPVAGLDAVEGSATSDFLAGRRRIEVPKNRRKPSRGVLT
LKGASGHNLKDVDAAFPLGVLCVVTGVSGAGKSTLVEETLYPALRKRLADEILPVAPFVD
LTGTGDLAEAVFLDQSPIGRSGRSNPVTYLKAFDEIRRTFAATHDAKLRNYGAGTFSFNI
EGGRCSACKGDGFRRIDMQFLPDVMVRCPDCKGTRYRPEVLEITYRGKNIAEVLDLTGRE
AFAFFRNRPKIQSRLRPLLDIGLDYLRLGQPAAMLSGGEAQRLKLAAFLGSSTAALNRAG
NVAHTLFILDEPTAGLHPSDMIRLIEALNSLVDRGHSVLVVEHSPEIMISADWIIDLGPE
AGDDGGRIVAEGTPEDVAKAGTLTGVVVAKALAQASEGGS
NT seq 2823 nt   +upstreamnt  +downstreamnt
atgcccacgccgcgttccgaatcctggatccgcctccgaggcgcccggacccacaacctc
agggcgatcgacctcgacctgccactgggccgcctgatcgcggtcaccggggtcagcggc
gcgggtaagagttcgctggcgttcgacaccctctacgccgagggccagcggcggtacgtc
gagaccttctcggcctacgcccggcagttcctcgaacccctcgaaaagcccgacgccgac
cggatcgagagcatcccgccagccatcgcgctggccgctcgcgagtcgcggccttcgggc
cggagcaccgtagggacgatcaccgaactccacgactacctcggccttctcttcacccgt
cacggccgagtcgtctgccggacctgcggcgagcccgtcgtcccggctaccccccgctcg
gtttcccaggcgatcgagacgttgcccgccggccaccgctacgaggtcgtctatccggtc
gagatcctcgccgagaccgacgtcgaagccctcggccgcggcctgctcgaacagggcctc
acgcgcgtccggctcggcgaccgcctgatcgacctgacgaccgagagcctcaatgtcggt
cggaccgaggcgacccccgccgtccagatcgaggtcgtcgtcgaccgcctgacgcgcggc
aaggactcgatccgccgccggctcgattcgatcgagacggccttcacgaagggactcgga
cggtgtcggatcgtgaccgggtccgactcgtggacgttcgtccgcggttggcgatgcagc
cgatgcgggaccgaccaccttgaaccccagccgaacctgttccgctacaccagcccgctt
ggcgcgtgccctcgttgcgaggggctggggagcgtcgtcgacctcgacatggccaagatc
gtccccgacccctcgaaatcgctccgcgaaggggccgtggccgcctggaacacgcccgcg
caccgggggctccgcgatcagttgatcgtcgaggggccggcgctcggcctgccggtcagc
gtcccgttccagaacctcgacgccgagcaagtccgcatcctcgtcgagggcgttccggcc
gccgggtttccgggtctggcggggttcttcgagcggctcgaccgcaagtcgtacaaggtc
gcggtccgggtcttcctcagccgttggcggcggtatcggacgtgtcccgactgccagggc
gcgcggctccgtcccgaggcgctcgccgtccggatcgaggggacgaacatcgccgagttc
tcggccctctcggtcggccgcgcccgcgagctgctggagtcgtggggcggactcgacgac
gccggaatgggccgtcttcgagccccgatcgccgcgcggctcgactacctgacgcggatc
ggcgtcggctacctgacgctcgaccggccgtcgcggacgatctcggccggcgagctgcgg
cgggtgacgatggtcaagacgctgggctcgggcctggtcgggacgctctacgtcctcgac
gagccgaccatcggcctgcacgcccacgacgtcggccggctggtcggcgtgctccaagcg
cttcgcgacgagggtaacaccctggtcgtcgtcgaccacgaggccgacgtcgtccgcgcg
tccgatcacgtcgtcgacctcggcccgggcgcgggcgacgccgggggacgggtgctctac
tccggtcccgtcgcgggcctggacgcggtcgagggctcggccaccagcgacttcctcgcc
ggccgcaggcggatcgaggtccccaagaaccgtcggaagccgtcgcgcggggttttgacc
ctcaagggggcctcgggacacaacctgaaggacgtcgacgcggctttcccgctcggcgtc
ctctgcgtcgtcactggggtcagcggcgcggggaagagcacgttggtcgaggagacgctc
tacccggcccttcgaaaacggctcgccgacgagatcctcccggtcgccccgttcgtcgat
ctgacggggacgggcgaccttgcggaagccgtgtttctcgaccagtcgccgatcggccga
tcggggcggtcgaacccggtgacgtacttgaaggcgttcgacgagatccgtcggacgttc
gccgcgacccacgacgccaagctccgcaactacggggccgggacgttcagcttcaacatc
gagggcggccggtgctcggcctgcaagggggacggcttccggcgtatcgacatgcaattt
ctccccgatgtgatggtccgctgccccgactgcaaggggacccggtatcgtcccgaggtg
ctcgaaatcacgtatcgcggcaagaacatcgccgaggtcctggatctgaccggccgcgag
gcgttcgccttcttccgcaaccgcccgaagatccagtcgcggctgcggccgctgctggac
atcgggctcgattatctgcggctcggccagccggccgcgatgctctccggcggcgaggca
cagaggctcaagctggcggcgttcctcggcagctcgaccgccgccctcaaccgcgcgggg
aacgtcgcgcacacgctgttcatcctcgacgagccgaccgccggcctccacccgtccgac
atgatccggctgatcgaggccctcaacagcctggtcgatcgaggccattcggtgctggtc
gtcgagcacagcccggagatcatgatctcggccgactggatcatcgacctcggccccgag
gcgggcgacgacggcggccggatcgtcgccgagggcacgcccgaggacgtcgccaaggcc
ggcacgctcaccggcgtcgtcgtcgcgaaggccctggctcaagcatctgaaggcgggtcg
tga

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