KEGG   Paludisphaera borealis: BSF38_04598
Entry
BSF38_04598       CDS       T04622                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
pbor  Paludisphaera borealis
Brite
KEGG Orthology (KO) [BR:pbor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pbor03016]
    BSF38_04598 (truD)
Enzymes [BR:pbor01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     BSF38_04598 (truD)
Transfer RNA biogenesis [BR:pbor03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BSF38_04598 (truD)
 Prokaryotic type
    BSF38_04598 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: APW63040
UniProt: A0A1U7CVR6
LinkDB
Position
5922204..5923382
AA seq 392 aa
MKLKRQPEDFQVEELPRVTLAPQGRFTYYKLTKRGLGTLEAIEAIRRHWNLPGRSVSYGG
LKDRHAVTVQYLSIFDGPDVSLHQASLELEPLGKLERPYTPQDFTGNRFEIVLRDMTAEA
AARAGTQLEALSRDGLPNYFDDQRFGSVGFSGEFIAEAWLKGDHERALRLAFAEPNPFDR
PDTKARKATLRECWGDWAAAKAGLDRSSERSIVTYLVDHPTDFRGAFARLRRELRSLYFA
AFQSHLWNLVLAGWIERNTRVEQRSPVDLKVGVFPFPVGLDEDQRKAIAAVPLPLPSSRN
KPGDGPVDEITTDVLAAFGLTWTDMRVKHLKDVFFSKGSRDPLLVPENVKTEVFKDDLHR
NKQAIRLAFELPKGSYATILVKRITEAAGSGS
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgaaactgaaacgtcagcccgaagatttccaggtcgaagaactgccgcgcgtcacgctc
gcgccccaagggcggttcacgtactacaaactaaccaagcgcggcctgggaacgcttgag
gcgatcgaggcgatccgccggcactggaacctccccggacggagcgtcagctacggcggt
ctcaaggaccgccacgccgtcacggtccagtacctgtcgatcttcgacggccccgacgtc
tcgctgcaccaggcgtccctggagctggagccgctggggaagctcgaacggccgtacacg
cctcaagacttcaccggcaaccggttcgagatcgtgctccgcgacatgaccgccgaggct
gcggcccgagccgggacgcagcttgaggcgctgtcgcgcgacggcctgcccaactacttc
gacgatcagcggttcggctccgtggggttctcgggcgagttcatcgccgaggcctggttg
aaaggcgaccacgagcgcgccctgcggctggcgttcgccgagccgaacccgttcgaccgc
ccggacacgaaggcgcgcaaggccaccctccgcgagtgctggggcgactgggcggcggcc
aaggcggggctcgaccgctcgtccgagcggagcatcgtgacctacctcgtcgatcatccg
accgacttccgaggggctttcgcccggctccgtcgcgagctgcgaagcctgtatttcgcg
gcctttcagagccatctgtggaacctggtcctggccggctggatcgagcggaacacgcgc
gtcgaacagcggtcgcccgtcgatctcaaggtcggcgtgtttccgttcccggtcgggctc
gacgaggaccaacggaaagcgatcgccgccgttccgctcccgctgccgtcgtcgcggaac
aaaccaggcgacgggccagtggacgagatcacgaccgacgtcctcgccgcgttcggcctg
acgtggacggacatgcgggtgaagcatctcaaggacgtcttcttctcgaagggctcgcgc
gatccgctgctcgttcccgagaacgtgaagaccgaggtcttcaaggacgatctgcaccgc
aacaagcaggcgatccggctggcgttcgagctgccgaaggggtcgtacgccacgatcctg
gtcaagcggatcaccgaagcggcggggagcgggtcatga

DBGET integrated database retrieval system