Paludisphaera borealis: BSF38_04661
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Entry
BSF38_04661 CDS
T04622
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pbor
Paludisphaera borealis
Pathway
pbor02024
Quorum sensing
pbor03060
Protein export
pbor03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BSF38_04661 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BSF38_04661 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSF38_04661 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbor02044
]
BSF38_04661 (ffh)
Enzymes [BR:
pbor01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
BSF38_04661 (ffh)
Secretion system [BR:
pbor02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BSF38_04661 (ffh)
Eukaryotic Sec-SRP protein
BSF38_04661 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_33
AAA_30
AAA_31
APS_kinase
AAA_18
AAA_24
AAA_5
AAA_19
KTI12
AAA_17
nSTAND3
NPHP3_N
ResIII
Rad17
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
APW63100
UniProt:
A0A1U7CVX1
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All DBs
Position
6006178..6007665
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AA seq
495 aa
AA seq
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MFDDLQKRLSSAFRQFRVSGVLTEANMKEGLREVRTALLEADVNYNVVQDFMTRVTDKAV
GTQVVKSVRPEQQIVKIVHDELVDLMGPSDPTIRFEKTGTTVLMLCGLQGSGKTTTSGKL
AKLLTSQNRKPMLVAADLQRPAAVEQLKVIGAQLGVPVYTQENSNPVKVCQDALIEANRR
GCDTLILDTAGRLHVDDELMAELVQIEKKVKPHQVFFVCDAMTGQDAVASAEAFNAALEL
DGVIMTKLDGDARGGAALSVRRVTGVPVKFVGKGEKLDKLDPFDPERLVGQMLGMGDVVG
LVEAAQSAVDEEEALRQQERMAKGKFDLNDFRQQIVQIKKMGSVQDVMGMFPGMSQMSEN
LSGLDADGEIKRIQGIIDSMTQRERSRPDLIDISRRRRIAAGAGVDPSDVSGLVKQFDAM
AAFVKQMAQMTMLDKLKALTGLGRAAANNPGARLFSPKVGTGKRLTPKEKEKLRKQREKE
ERKKRRDERDRPTPS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgatctacaaaagcgtctctcatcagcctttcggcagtttcgcgtcagcggc
gtcttgaccgaagcgaatatgaaggaaggcctgcgcgaagtccgcacggccttgctcgag
gccgacgtgaactacaacgtcgtccaagacttcatgacgcgcgtcaccgacaaggcggtc
ggcacccaggtcgtcaagagcgtccgccccgagcagcagatcgtcaagatcgtccatgac
gagctggtcgacctgatggggccgtccgacccgacgatccggttcgagaagaccggcacg
acggtcctgatgctctgcggcctgcaaggctcgggcaagacgacgaccagcggcaagctc
gcgaagctgctgacgtcgcagaaccgcaagcccatgctggtcgccgccgacttgcagcgc
cccgccgccgtcgagcagttgaaggtcatcggagcccagctcggcgtccccgtctacacg
caggagaactcgaaccccgtcaaggtctgtcaggacgccctgatcgaggccaatcggcgc
gggtgcgacaccctgatcctggacaccgccggccggttacacgtcgacgacgagttgatg
gccgaactggtccagatcgagaagaaggtcaagccgcaccaggtgttcttcgtctgcgac
gccatgacggggcaggacgccgtcgcctcggccgaggcgttcaacgccgcgctcgaactc
gacggcgtgatcatgaccaagctcgacggcgacgcgcgaggcggagccgcgctttcggtc
cgtcgcgtcaccggcgtccccgtcaagttcgtgggcaagggggagaagctcgacaagctc
gacccgttcgaccccgagcggctggtcggccagatgctgggcatgggcgacgtcgtcggc
ctggtcgaggcggcgcagtccgcggtcgacgaggaagaggcgcttcgccagcaagagcgg
atggccaaggggaagttcgacctcaacgacttccgccagcagatcgtccagatcaagaag
atgggctcggtccaggacgtcatgggcatgttcccgggcatgagccagatgtccgagaac
ctcagcggcctggacgccgacggcgagatcaagcgcatccagggcatcatcgacagcatg
acccagcgcgagcggagccgtcccgacctgatcgacatctcccgtcgccgccggatcgcg
gcgggcgccggcgtcgacccctcggacgtctcgggcctcgtcaagcagttcgacgccatg
gccgccttcgttaagcagatggcccagatgacgatgctcgacaagctcaaggcgttgacc
ggactgggtcgggccgccgccaacaaccccggggctcgcctgttctctcccaaagtgggc
accggcaagcggctgacgcccaaagagaaggaaaagctccgcaagcagcgagaaaaagaa
gaacggaaaaaacgacgcgacgagcgcgaccggcctacgccctcgtga
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